Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele01g0267 | ATGATGAAGCCCATTAAAATGTGTTTGTGGTGGACAACTTTATTAGCAGTTATGGCAGTTGCAGCCGCCCAATCCCTGGCTGGCTGCCCCAAGAAATGCGGAGAGGTTGAGATTCCATATCCATTTGGGGTAGGCGTTCAATCTGGTACCGATAACCAGTGTTTCTTTGAGGAGGCGTTTCATGTGGATTGTAAAAACTCCATGGTATTTCAAGGCAACGTCGAAATCTCAAACATATCCCTCGAAGGTCATATGGATATGTCCATGCCTGTTTCCAAGGTCTGTTTCAATGATACAGGGGGAGTCCTAGATAACAGTATGAGAGTGACTCTGTCAACCCCAGTTTTCACCATCTCTAGCACTAAAAACAAGTTCGTAAGCCTTGGCTGCGACTCTTACGGCTACCTGAACAGTTTCCAGAACAGTCACAGATATTCCACTGGCTGCTTGACGAGATGTAACGGAGTTCCCAACCAGCAGAGCAATGGAACTTGTTCTGGGATTGGGTGCTGCCAGGTGGATATTCCTCTGGGAATGAGGAATATCAGTATTGAAGCCTTCAGCTTCAATTTGCAAGGAAAGGCGTCCGACTTCAACAACTGTAGCTATGCTTTTGTGGCCAAGCAAGGCTGGTTTAATTTCTCTACGGCTGATCTCAGGTCCTTGCCGTTCGAGAAGGCGCTGCTGGTAGTGGATTGGGCTATTTCCAACGGCACATGTGAAAGTGAGAGGACATCACCGGACTATGCCTGCAAATCCATCAACATCGACTGCGAAGACTCGGGCTATGGATTTGGGTACCGTTGCAGATGCAAACCCGGTTTTAAAGGGAACCCTTATCTTCCCGAGGGTTGCCAAGGTCATCATTCATTAATTCCCTCCTTTTCTTTGTTTTTACTTTTTAGAGCATATATTCATGAAGATAACTGTCGTAACACTGTTGGGTCTTTTGAATGTTATTGCCCTCGCGGTTACACTGGGAATGGAACCAAGGAAGCAGGATGTCACCCACCCTGGCTCCAAAATCCACTCACAATACGTCTCATTGGTGCCAGCGTAGGATTGGCAGTTCTTTTTGTGTGTGTGACTTGGCTGTATTTGATATACCAGAAGAGGAAGCTGATGAAGCAAAAGGACAAATTCTTTCGACAAAATGGGGGCGCTATTTTGCAACAAAAGCTCTCTGTAAAACAAGGCTCCTCCCTCACATCTAAAATCTTTACTGCACAAGAATTGAGAAAGGCTACTGACAACTTCCACGACGACTTAGTTATTGGCCGCGGTGGTTTTGGTACCGTTTACAAAGGAATTCTCCCTGACAACACTGTTGTCGCAATCAAGAAATCGAGACTGGTAGATCAAAGCCAAATTGAACAGTTCATTAATGAGGTGATTATACTCTCCCAGATAAATCATAGGAACGTGGTCACACTGCTAGGTTGTTGCCTAGAAACAGAGGTTCCTTTGTTAGTTTATGAGTTTGTTAATAATGGCACCCTGTTCGAATCCATACATAACAAAAGCAAAGCCTTTGGTTTTACTTGGGAAACCCGTTTGAGGATAGCAGCAGAAGTGGCAGGAGCACTGTGAAAGGCGCTGTCATTTGATGGACCAGAAGAGGAAAGAAGCCTCGCAATGTACTTCCTATCATCCTTGAATGAGGGTCGCTTGTTTGAAGTGGTTGAAAGAGGCATGGGGAATGACGAAAACAAGCAGATGTTGAAAGAAGTGGCTGAGCTCGCAGCGAGGTGCTTGAGACTTAAAGGGGAGGAGAGACCAGGCATGAAGGAAGTGGCAATGGAGTTGGAGGGAATAAGGATGACAGGGAAACATCCATGGATCAGCAAAGACTTCAACGCAGAGGAATCACAGTCATTAATTTATCGTCAGACGTCCTTTTACGGAATCTGTTGA | 1914 | 0.4545 | MMKPIKMCLWWTTLLAVMAVAAAQSLAGCPKKCGEVEIPYPFGVGVQSGTDNQCFFEEAFHVDCKNSMVFQGNVEISNISLEGHMDMSMPVSKVCFNDTGGVLDNSMRVTLSTPVFTISSTKNKFVSLGCDSYGYLNSFQNSHRYSTGCLTRCNGVPNQQSNGTCSGIGCCQVDIPLGMRNISIEAFSFNLQGKASDFNNCSYAFVAKQGWFNFSTADLRSLPFEKALLVVDWAISNGTCESERTSPDYACKSINIDCEDSGYGFGYRCRCKPGFKGNPYLPEGCQGHHSLIPSFSLFLLFRAYIHEDNCRNTVGSFECYCPRGYTGNGTKEAGCHPPWLQNPLTIRLIGASVGLAVLFVCVTWLYLIYQKRKLMKQKDKFFRQNGGAILQQKLSVKQGSSLTSKIFTAQELRKATDNFHDDLVIGRGGFGTVYKGILPDNTVVAIKKSRLVDQSQIEQFINEVIILSQINHRNVVTLLGCCLETEVPLLVYEFVNNGTLFESIHNKSKAFGFTWETRLRIAAEVAGALXKALSFDGPEEERSLAMYFLSSLNEGRLFEVVERGMGNDENKQMLKEVAELAARCLRLKGEERPGMKEVAMELEGIRMTGKHPWISKDFNAEESQSLIYRQTSFYGIC | 637 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele01g0267 | 637 | CDD | EGF_CA | 310 | 327 | - | - | |
Lele01g0267 | 637 | Pfam | Protein tyrosine and serine/threonine kinase | 424 | 529 | IPR001245 | GO:0004672|GO:0006468 | |
Lele01g0267 | 637 | SUPERFAMILY | EGF/Laminin | 305 | 330 | - | - | |
Lele01g0267 | 637 | Gene3D | Transferase(Phosphotransferase) domain 1 | 396 | 529 | - | - | |
Lele01g0267 | 637 | Gene3D | Transferase(Phosphotransferase) domain 1 | 530 | 623 | - | - | |
Lele01g0267 | 637 | ProSiteProfiles | Protein kinase domain profile. | 419 | 637 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele01g0267 | 637 | Gene3D | Laminin | 301 | 335 | - | - | |
Lele01g0267 | 637 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 29 | - | - | |
Lele01g0267 | 637 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 531 | 608 | IPR045274 | GO:0007166 | |
Lele01g0267 | 637 | SUPERFAMILY | Protein kinase-like (PK-like) | 398 | 530 | IPR011009 | - | |
Lele01g0267 | 637 | ProSitePatterns | Protein kinases ATP-binding region signature. | 425 | 448 | IPR017441 | GO:0005524 | |
Lele01g0267 | 637 | Pfam | Wall-associated receptor kinase galacturonan-binding | 29 | 84 | IPR025287 | GO:0030247 | |
Lele01g0267 | 637 | FunFam | Wall-associated receptor kinase 2 | 389 | 494 | - | - | |
Lele01g0267 | 637 | Coils | Coil | 570 | 590 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele01g0267 | Lele-ChrLele01 | 1509776 | 1512162 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele01g0267 | 493 | 613 | Receptor kinase-like Gene Family | AT1G21230 | 38.525 | 1.51e-17 | 84.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Lele01g0267 | PK_Tyr_Ser-Thr | 8.7e-17 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele01g0267 | 01 | 1509776 | 1512162 | Lele03g0272 | 03 | 1502171 | 1504591 | hybridization |