Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0266 ATGGAGACGATGCGACGACTTACGAAGCTTTGGTTGATTCCATTATTACTGGTAGCCGTAGCCAAAGCTCAATCCCTTGAAGGCTGCCTACCTAAATGTGGAGATGTCGAGATTCCTTATCCATTTGGCGTTGGTGTGCAACCTGGTACTGGTCGCAATTGCTTCCTACAAGAATCATTTAATCTCACTTGCAATATCTCCACCGCCACCTCCACCTCCACATTATTCTACGGAGACCATCCAGTTTCCAACATATCTGTTCAAGGTGGTCATCTTGACATTTCCATGTCTGTCTCCAAGATTTGTTACAATCAACCTGGCGGAACTGTGTCTAACAATCCCTATCTTGGAAATACTCCTTCTTTCTCCATTTCCAGCACCCAAAACAAGTTCCTAAGTGTCGGTTGCGACACTTTGGGCATAATTCAATTCCAAAACAATCGTTCTTATTTTGGTGGCTGCGTCACGCTATGTGACAGACCTCCTCAACAAGATTTGAATGATAAAACTTGTTCGGGGACTGGGTGTTGCCAGGTGGATATTCCTGTGGGAACGAGAAATATCAGCGTTGCGGCTTCCTCCGTCTTCAACCACTCAGAAGTGTTGGATTTCAACAACTGCAGCTATGCTTTTGTTGCCAAACAGGGTTGGTTTAATTTCTCCGTTGATTATCTACGCGACTTCCCATATGACATGGTCCCACTTGTCCTAGATTGGACCGTTTCAGATGATACTTGTCAAGCTGCTTCGACCAAATCAGACTATGCCTGCACCTCTAACACTGGTTGTGTCGACTCCGATGATGGATTTGGGTACAACTGCAGATGCAAACCCGGTTTCGATGGAAACCCGTACCATCCAGATGGGTGTCACGATGTAGACGAATGCCAGGAATCGACCAACAATTGCATAAGTAAAGAAAATTGCCGCAACACGATTGGATCTTTTGAGTGTTTTTGTCCGCCTGGCTACTCTGGGAATGGAACCACGGCCGGAGGCTGCCACCCACCCTTGTCCAAGAATCCACTTACCATGGTCTTCATTGGTGTAAGTATAGGCTTGGCAGCTCTGTTTATGAGTTTGTCTTGGCTGTACTTGGTCTCCCAGAAGAGGAAGCTCGTGAAGCAAAAGCAAAAATTCTTTCGTCAGAACGGTGGTTCCATCTTACAACAAATAGTCTCCGGTAGACATGGTCCATCCCTTGCAGTTAAAATCTTCACTGCTGAGGAATTGAAAAGGGCCACCAACGACTATCATGACAACTTGATCATTGGTCGAGGAGGTTTTGGTACTGTTTATAAAGGATTTCTCCCAGACAAGAAAATTGTCGCAATCAAGAAATCCAAACTGATGAATCAAAGCCAAGTGGAACAATTCATTAACGAGGTGATTGTGCTCTCCCAGATAAATCACCGTAATATAGTCAAGCTTTTGGGTTGTTGTCTAGAAACAGAAGTTCCTTTATTGGTCTATGAGTTTATAAATAACGGGACCCTCTTTGATTTAATACATAACAAAAGAAAATCTTCTCTAGTGACTTGGGAAACACGTTTGAGGATAGCATCAGAAGTAGCAGGGGCACTATCGTATCTACATTCTGCTGCTTCCATAGCCATAGTGCACAGAGACATCAAGTCCTCTAACATCCTTCTAGACGAGAGTTGCACCGCCAAGGTGTCTGATTTTGGAGCTTCGAGGTTGGTTCCACTGGATGAAACAGGGTTAGCCACAGTGGTACAAGGTACATTTGGATATTTGGATCCAGAATACATGCAAACAAATCAACTGACAGAGAAGAGCGATGTGTATAGTTTTGGGGTGGTGCTCGTAGAGCTGCTAACTGGGAAGAAAGCGGTTTCGTTTGAGAGGCCAGAAGAGGAAGTAAATCTTGCAATGCACTTCCTTTCAAACCTGAAGCAGGGTCACTTACATGAAGTTGTGGAGAATGGCATGATGAATGATGAAAATAAGGAGAGGGTGAAGGAGGTGGCGATGCTTGCAGCGAGGTGTGTGAGACTGAGAGGAGAGGAGAGACCCAGCATGAAGGAAGTAGCAGCAGAGTTAGAGGGAATAAAGATGACGATAGGGAATCAGCCATGGATGAAGAAAGAGCTGAATTTGGAGGAAGCTCAAGCATTGCTAGGGGAGACCTCCAATTGTAGTGAGTATGGCGAGGATAGCATTAGTCATGGAAACACAACAGTTTGGGATAGTATTACGGATCATGTTCTAATTGACTTGGACCGCGGTAGATAG 2256 0.4486 METMRRLTKLWLIPLLLVAVAKAQSLEGCLPKCGDVEIPYPFGVGVQPGTGRNCFLQESFNLTCNISTATSTSTLFYGDHPVSNISVQGGHLDISMSVSKICYNQPGGTVSNNPYLGNTPSFSISSTQNKFLSVGCDTLGIIQFQNNRSYFGGCVTLCDRPPQQDLNDKTCSGTGCCQVDIPVGTRNISVAASSVFNHSEVLDFNNCSYAFVAKQGWFNFSVDYLRDFPYDMVPLVLDWTVSDDTCQAASTKSDYACTSNTGCVDSDDGFGYNCRCKPGFDGNPYHPDGCHDVDECQESTNNCISKENCRNTIGSFECFCPPGYSGNGTTAGGCHPPLSKNPLTMVFIGVSIGLAALFMSLSWLYLVSQKRKLVKQKQKFFRQNGGSILQQIVSGRHGPSLAVKIFTAEELKRATNDYHDNLIIGRGGFGTVYKGFLPDKKIVAIKKSKLMNQSQVEQFINEVIVLSQINHRNIVKLLGCCLETEVPLLVYEFINNGTLFDLIHNKRKSSLVTWETRLRIASEVAGALSYLHSAASIAIVHRDIKSSNILLDESCTAKVSDFGASRLVPLDETGLATVVQGTFGYLDPEYMQTNQLTEKSDVYSFGVVLVELLTGKKAVSFERPEEEVNLAMHFLSNLKQGHLHEVVENGMMNDENKERVKEVAMLAARCVRLRGEERPSMKEVAAELEGIKMTIGNQPWMKKELNLEEAQALLGETSNCSEYGEDSISHGNTTVWDSITDHVLIDLDRGR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0266 751 FunFam Wall-associated receptor kinase 2 388 493 - -
Lele01g0266 751 ProSiteProfiles EGF-like domain profile. 292 330 IPR000742 -
Lele01g0266 751 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 309 320 IPR000152 -
Lele01g0266 751 CDD EGF_CA 292 326 - -
Lele01g0266 751 CDD STKc_IRAK 424 691 - -
Lele01g0266 751 FunFam Fibrillin 2 287 332 - -
Lele01g0266 751 Gene3D Laminin 243 334 - -
Lele01g0266 751 SUPERFAMILY Protein kinase-like (PK-like) 400 689 IPR011009 -
Lele01g0266 751 Gene3D Phosphorylase Kinase; domain 1 389 493 - -
Lele01g0266 751 Pfam Calcium-binding EGF domain 292 334 IPR001881 GO:0005509
Lele01g0266 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Lele01g0266 751 SMART serkin_6 418 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0266 751 Gene3D Transferase(Phosphotransferase) domain 1 494 708 - -
Lele01g0266 751 SMART egf_5 245 291 IPR000742 -
Lele01g0266 751 SMART egf_5 295 335 IPR000742 -
Lele01g0266 751 SMART egfca_6 292 335 IPR001881 GO:0005509
Lele01g0266 751 FunFam Wall-associated receptor kinase 2 494 712 - -
Lele01g0266 751 ProSitePatterns Calcium-binding EGF-like domain signature. 292 318 IPR018097 GO:0005509
Lele01g0266 751 Pfam Wall-associated receptor kinase galacturonan-binding 29 90 IPR025287 GO:0030247
Lele01g0266 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 692 IPR045274 GO:0007166
Lele01g0266 751 SUPERFAMILY EGF/Laminin 292 327 - -
Lele01g0266 751 ProSitePatterns Protein kinases ATP-binding region signature. 424 447 IPR017441 GO:0005524
Lele01g0266 751 ProSiteProfiles Protein kinase domain profile. 418 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0266 751 Pfam Protein kinase domain 418 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0266 Lele-ChrLele01 1505695 1508517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0266 15 751 Receptor kinase-like Gene Family AT1G21230 45.119 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele01g0266 Pkinase 1.7e-52 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0266 01 1505695 1508517 Lele03g0271 03 1498041 1500851 hybridization