Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0264 ATGGCAGTTGCAGCCGCCCAATCTCTGCCTGGCTGCCCCAAGAAATGCGGAGCAGTTGAGATTCCATATCCATTTGGGGTAGGCGTTCAATCTGTTACCGATAACAAGTGTTTCTTTGAGGAGGCGTTTCGTGTGGATTGTAAAAACTCCAAGTTATTTCACACAAGCGTCGAAATCTCAAACATATCCCTCGAAGGTCATATGGATATGTCCATGCCTGTTTCCAAGGTCTGTTCCAATGATACAGGGGAAGTCCTAGATAACAGTATGAGAGTGACTCTGTCAACCCCAGTTTTCACCATCTCTAGCACTAAAAACAAGTTCGTAAGCGTCGGCTGCAACACTTACGGCTACTTGAACAGTTTCCAGAATAGTCACAGATATTCCACCGGCTGCTTGACGAGATGTGACGGAGTTCCCAACCAGCAGAGCAATGGAACTTGTTCTGGGATTGGGTGCTGCCAGGTGGATATTCCTCTGGGAATGAGGAATATCAGTATTGAAGCCTTCAGCTTCCCTGAGCAAACATTGGCGTCCGACTTCAACAACTGTAGCTATGCTTTTGTGGCCAAGCAAGGCTGGTTTAATTTCTCTACGAATGATGTCAGGTCCTTGCCGTTTGAGAAGGCGCTGCTGGTAGTGGATTGGGCTATTTCCAACGGCACATGTGAAAGCGATAGGACATCACCGGACTATGCCTGCAAATCCATCAACACCGACTGCGAAGACTCGGGCCATGGATTTGGGTACCGTTGCAGATGCAAACCCGGTTTTGAAGGGAACCCTTATCTTCCCGAGGGTTGTCAAGATATAGACGAGTGTAAGGATTCGACCCATAATTGCACAAGTGAAGATAATTGTCGTAACACTGTTGGGTCTTTTGAATGTTATTGCCCTCGCGGTTACACTGGGAATGGCACCAAGGAAGCAGGATGTCACCCGCCCTGGCGCCAAAATCTACTCACAATACTTCTCATGGGTAACCATTTTAACACTACGTTGCTTGCAGGCGTTTGTGTAGCCTTGTTAGTTGGCTTCACCCTGGTCTCCTCATTATGCTGGGCACACAAGCAAAGAACTCTGAAACAAATTAGGCAAAGAAATTTCGAGCAAAATGGAGGAAACATGCTTCTGCAAAGACTTTCACAACAACAAGGATACGCTGACAGAACCAACATATTTACACAAGTGGAGCTTCAGAATGCCACAAACAACTTCGATGAAGATAGAATCCTTGGCCGTGGGGGACAAGGCACAGTTTACAAGGGTATATTACTGGACAACACGGTGGTTGCCATTAAGAAGTCTAGAGTAGGAGGGGATCCCAGACAAATTAAGGATTTTATCAATGAAGTGGTCGTGCTTTCCCAAATCAACCATCGGAATGTGGTCAAACTTTTGGGTTGTTGTCTTGAAACCGAAGTCCCTTTGTTAGTTTATGAGTTTGTGGACAATGGCACCCTTCTTGCCCACATTGACCCATCAAAGAATGATTGCTGTATTTCATGGGAGACTCGATTAAGGATAGCTGCAGAAACTGCTGAGGCCGTTTCATACTTACACTCTGCAGCTTCTATTCCGATTATTCATCGGGACATAAAGTCTACCAACATATTACTGGACCACAATCATAGAGCAAAGGTGTCTGATTTTGGAGCTTCAAGACTTGTTCCACTTGATGAAGCTCAAGTTACCACAGTGATACAAGGCACACTTGGATACTTGGATCCAGAGTACCTCCACACAGGTCAGTTAAATGAGAAGAGTGATGTTTATAGCTTTGGGGTTGTGCTTGTAGAGCTACTGACGGGAAATAAAGCAGTTGAATACAATAGACCAGAGCAGCGAAATTTGGCTATGTACTTTGTGTCTTCAATAAAAGAGGACCGTTTATGGGAAATTGTCGATAGGCAATTGTTAGATCATAAGAAGAATGCTGAACAGTTGAAGGAAGTTGCTTTTCTGGCAAGGAGGTGTGTTAGAGTGAACGGAGAGGAAAGACCAACTATGAAGGAAGTAGCAATGGAATTGGAGGGTTTGATTGCAATGGAAAGGCATCCTTGGGTGAAGGGTGGAGATGCCATGGCAGAAGAAACTGAATATTTGCTTGTTCATGTGCCAGATGAACATGGGGGTGCCAGTACTAGCAATTCATCTGGATATGATACCTTACGAAAGCAGATGGCATTTGAGATTGCAGATGGGCGTTGA 2211 0.4514 MAVAAAQSLPGCPKKCGAVEIPYPFGVGVQSVTDNKCFFEEAFRVDCKNSKLFHTSVEISNISLEGHMDMSMPVSKVCSNDTGEVLDNSMRVTLSTPVFTISSTKNKFVSVGCNTYGYLNSFQNSHRYSTGCLTRCDGVPNQQSNGTCSGIGCCQVDIPLGMRNISIEAFSFPEQTLASDFNNCSYAFVAKQGWFNFSTNDVRSLPFEKALLVVDWAISNGTCESDRTSPDYACKSINTDCEDSGHGFGYRCRCKPGFEGNPYLPEGCQDIDECKDSTHNCTSEDNCRNTVGSFECYCPRGYTGNGTKEAGCHPPWRQNLLTILLMGNHFNTTLLAGVCVALLVGFTLVSSLCWAHKQRTLKQIRQRNFEQNGGNMLLQRLSQQQGYADRTNIFTQVELQNATNNFDEDRILGRGGQGTVYKGILLDNTVVAIKKSRVGGDPRQIKDFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVDNGTLLAHIDPSKNDCCISWETRLRIAAETAEAVSYLHSAASIPIIHRDIKSTNILLDHNHRAKVSDFGASRLVPLDEAQVTTVIQGTLGYLDPEYLHTGQLNEKSDVYSFGVVLVELLTGNKAVEYNRPEQRNLAMYFVSSIKEDRLWEIVDRQLLDHKKNAEQLKEVAFLARRCVRVNGEERPTMKEVAMELEGLIAMERHPWVKGGDAMAEETEYLLVHVPDEHGGASTSNSSGYDTLRKQMAFEIADGR 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0264 736 ProSiteProfiles Protein kinase domain profile. 406 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0264 736 SMART serkin_6 406 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0264 736 ProSitePatterns Calcium-binding EGF-like domain signature. 270 296 IPR018097 GO:0005509
Lele01g0264 736 FunFam Wall-associated receptor kinase 2 376 482 - -
Lele01g0264 736 CDD EGF_CA 270 304 - -
Lele01g0264 736 SUPERFAMILY Growth factor receptor domain 219 353 IPR009030 -
Lele01g0264 736 Gene3D Transferase(Phosphotransferase) domain 1 483 691 - -
Lele01g0264 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Lele01g0264 736 SMART egfca_6 270 313 IPR001881 GO:0005509
Lele01g0264 736 Pfam Protein kinase domain 407 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0264 736 Pfam Wall-associated receptor kinase galacturonan-binding 12 67 IPR025287 GO:0030247
Lele01g0264 736 CDD STKc_IRAK 412 680 - -
Lele01g0264 736 SUPERFAMILY Protein kinase-like (PK-like) 388 677 IPR011009 -
Lele01g0264 736 Pfam Calcium-binding EGF domain 270 312 IPR001881 GO:0005509
Lele01g0264 736 FunFam Fibrillin 2 265 310 - -
Lele01g0264 736 ProSiteProfiles EGF-like domain profile. 270 313 IPR000742 -
Lele01g0264 736 Gene3D Phosphorylase Kinase; domain 1 378 482 - -
Lele01g0264 736 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 5 680 IPR045274 GO:0007166
Lele01g0264 736 SUPERFAMILY EGF/Laminin 269 305 - -
Lele01g0264 736 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 287 298 IPR000152 -
Lele01g0264 736 SMART egf_5 222 269 IPR000742 -
Lele01g0264 736 SMART egf_5 273 313 IPR000742 -
Lele01g0264 736 Gene3D Laminin 220 312 - -
Lele01g0264 736 FunFam Wall-associated receptor kinase 2 483 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0264 Lele-ChrLele01 1495964 1498356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0264 3 736 Receptor kinase-like Gene Family AT1G21230 45.710 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele01g0264 Pkinase 1.2e-47 CL0016