Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0255 ATGGAGAGCCCTCCTTCAACGTCTTATGTGATCCTTGCATGTGATGCCACCAAAGATAGCAGTGAGCATGAGATCAAATCCATTCTTAATCACGTACGAGGTACCGGTGGCATTTTATATGCAGGTCACAAATTGCTTGTGCTCGGGGTCTTGCATAAGGTGCCACACCCCATGGGGTATCAGACCTTACCATGCCCCGAGTCTTTTGCTGGCACGAATGTCCGTGCAATGGATGAAGTAGTTGGCAAGAAACTTGATTCATATGCAAATATGCTTTTGCCAATGTATGAAGATTGGCAAAATGCAGGGATAAGCATCGAAGTCAAAATCACTGCAGGTTTTCCAATCAAACAGGTTATATTGCAAGAGGTTGCATGCTATAACGCAGCTTGGATTGTACTTGATAGGCACCTTCGACGGGACTTGAGATTCCTTAACAAGATATCATCCAAGGTTGCACTGATTAAAGATGACTTGTTCGTGGACATCTGGAGATCTCATCAATCAGTTGAAACAGATTTCACAGATAACAAGCTTGCTTATTCTCTGTCTAAATTTGTTTCTCTATCTGATTGTCAAAGTGTTTCAGACATCGGGCATTCTATTTCCTCTTTCAAAAATTGTCCCCCATCCATGGTTTCTTCTGACAACACACACACATTTAGGAACAGCACAAAGCACTCATTTGCATCACATGAACAATTCTTCTCATCAGATCCTGAGTCGTCTTCTAACCAAGGTCCCCTTACTTCTCAGATTGAACAAAAGCAAAACAAGTATGGGTTTATGCCAAAATTTTCAGATGCTCAAATTCTTTGTGCTCGTTGTGGGATGAGGACTGAATTGTATGCTAAGGAGTCGATGAGGTTCAGCTATTCTGATATACAGATTGCAACAAACGATTTTTCAAAGGATAACTTACTGGGTGAAGGTGGTTATGGTCACGTATACAAGGGTATTCTTAGAGATGGACAGCAAATTGCTGCAAAGGTAAGAAAAGAAGAAAGTAGCCAGGGTTTTTCTGAATTTCATTCTGAGGTTTATGTCTTAAGTTTTGCACGACACAAGAATATAGTGATGCTGCTGGGTTACTGTTGCAAAGAAAGGCAAAATATTTTGGTATATGAATATATTTGCAACAAGTCACTTGACTGGCATTTATTCGGTAAGTATGTAGATGTCTGTTGGAAGTATCATTTGTCTTGTTTACCTACTTGCATGACCGTATTTCCACTCGAAGATTTAGAATTTGAGAATCAAGAAAACAATTTTGCAGATAAAGATGCTGCAGTTCTCGAGTGGCCCCAGAGATATGCCATTGCCATTGGAACCGCAAAAGGATTGCGCTTTCTCCACGAAGAATGCCGTGGGGGGCCCATCATTCATCGAGACATGCGACCTAGCAATATACTTCTTACTCATGATTTTGTTCCTATGCTTGGTGACTTTGGCCTTGCCAAATGGAAGACCGGTAGCGATGAGATGATGCAAACAAGGATAATGGGCACATTTGGATACCTTGCTCCAGAGTATGCTGAAGATGGCGTTGTTTATGTGGGGACAGATGTGTATGCTTATGGAGTTGTTCTGCTACAGTTAATATCAGGACGCAAGGTGCGCATGTCCAGTAATCCTGATCAACCATCTCTCCGTCAATGGGCTGAGCCATTGATTGAGAAGTTGGCTTTACCAGAAATCATAGACCCACGTCTTGGGGTGTCATATGACACATATGAACTATACCTATTGGCAAAAGCGGCATACTTGTGTGTTCAAAGAAAGCCTGAGATGCGACCATCCATGGCAGAGGTAGTTCGCCTTCTTGAAGGAGAAAATGATCACTTCCATGCCTTGGCAGATCAGTTCGTGCCTAATTACTATCAATGA 1887 0.4202 MESPPSTSYVILACDATKDSSEHEIKSILNHVRGTGGILYAGHKLLVLGVLHKVPHPMGYQTLPCPESFAGTNVRAMDEVVGKKLDSYANMLLPMYEDWQNAGISIEVKITAGFPIKQVILQEVACYNAAWIVLDRHLRRDLRFLNKISSKVALIKDDLFVDIWRSHQSVETDFTDNKLAYSLSKFVSLSDCQSVSDIGHSISSFKNCPPSMVSSDNTHTFRNSTKHSFASHEQFFSSDPESSSNQGPLTSQIEQKQNKYGFMPKFSDAQILCARCGMRTELYAKESMRFSYSDIQIATNDFSKDNLLGEGGYGHVYKGILRDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGYCCKERQNILVYEYICNKSLDWHLFGKYVDVCWKYHLSCLPTCMTVFPLEDLEFENQENNFADKDAAVLEWPQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGSDEMMQTRIMGTFGYLAPEYAEDGVVYVGTDVYAYGVVLLQLISGRKVRMSSNPDQPSLRQWAEPLIEKLALPEIIDPRLGVSYDTYELYLLAKAAYLCVQRKPEMRPSMAEVVRLLEGENDHFHALADQFVPNYYQ 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0255 628 ProSitePatterns Tyrosine protein kinases specific active-site signature. 460 472 IPR008266 GO:0004672|GO:0006468
Lele01g0255 628 Pfam Protein tyrosine and serine/threonine kinase 305 607 IPR001245 GO:0004672|GO:0006468
Lele01g0255 628 Gene3D Transferase(Phosphotransferase) domain 1 419 622 - -
Lele01g0255 628 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Lele01g0255 628 Gene3D Phosphorylase Kinase; domain 1 269 377 - -
Lele01g0255 628 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 274 377 - -
Lele01g0255 628 PANTHER OS01G0750732 PROTEIN 235 613 - -
Lele01g0255 628 SUPERFAMILY Protein kinase-like (PK-like) 286 610 IPR011009 -
Lele01g0255 628 ProSiteProfiles Protein kinase domain profile. 302 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0255 Lele-ChrLele01 1452793 1456116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0255 290 609 Trihelix Transcription Factor Family AT5G38560 40.673 2.71e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele01g0255 PK_Tyr_Ser-Thr 2.2e-34 CL0016