Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0250 ATGGGCGTTGCTCTGAGTCAAGTTGAGGACACCAAGACTTGCCCTCGCGGTCACTGGAGACCCTCTGAGGATGAGAAACTCCACCAACTTGTTGAACAATATGGTGCCCAGAACTGGAATTCAATCGCCGAGAAGCTCCAAGGAAGATCAGGGAAAAGTTGCAGATTAAGGTGGTTCAATCAGCTTGATCCTAGGATTAACAGAAGGCCATTTACAGAAGAGGAAGAAGAGAGGCTACTGGCAGCTCATCGCATCCATGGGAATAAGTGGGCACTCATAGCGAGGCTTTTCCCAGGTCGTACCGATAACGCTGTGAAGAATCATTGGCATGTTACAATGGCACGCAAGCAAAGAGAACAATCTAAGTTATGCGGCAAGAGAAGCTTTCAAGATGTTTGTAACTATAATGATTCTAATTGCAGTAGTTCCTCCAAGAAAATCACATCAAATTCTTATCATGATGTGTTAATTAGTTCCAGAATGAATGGGTTAGAGAATGCCACTAGATTCTTTGATTTCCGTAACCTTGATCATAAAGATAGAATATTTGCCGATTCTCCCTCCACTTCTTTGGCTTCCTGGAGTTTTGCAACCTCCTCATCAAACGGTTCTCCTGTTGCGGATTCATTTAGAAGAGAAGGCAGAGATTTCTTCAACTCTCACTCCAGTAATCAGTACATATCAGGCATGCCCAAAGGTTCAGATAGGTTTCATTACAGAATTTATCCGAATTCTTCATCTGAAAATTACAGGAGACTGGTACCATCAAGTGCTTTAGGACTTTTTGCTTCCTATGATGATGGAAAGACAAAGAGGGACTTCACCAACTCCTGTGATAGATCGACATTCACCAAGTTACTGGTTTCTACGGATCAGCGAGGGCAGGAAGATGACGAGCCAATTGAACACAAAGAAGTTCCTTTTATTGATTTTCTTGGTGTAGGTGTCTCTTCGTCATAA 960 0.4281 MGVALSQVEDTKTCPRGHWRPSEDEKLHQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVTMARKQREQSKLCGKRSFQDVCNYNDSNCSSSSKKITSNSYHDVLISSRMNGLENATRFFDFRNLDHKDRIFADSPSTSLASWSFATSSSNGSPVADSFRREGRDFFNSHSSNQYISGMPKGSDRFHYRIYPNSSSENYRRLVPSSALGLFASYDDGKTKRDFTNSCDRSTFTKLLVSTDQRGQEDDEPIEHKEVPFIDFLGVGVSSS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0250 319 FunFam MYB transcription factor 69 140 - -
Lele01g0250 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 62 IPR017930 -
Lele01g0250 319 PANTHER MYB PROTEIN-RELATED 16 150 - -
Lele01g0250 319 FunFam MYB transcription factor 16 67 - -
Lele01g0250 319 CDD SANT 70 110 IPR001005 -
Lele01g0250 319 SUPERFAMILY Homeodomain-like 15 109 IPR009057 -
Lele01g0250 319 Pfam Myb-like DNA-binding domain 16 62 IPR001005 -
Lele01g0250 319 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Lele01g0250 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele01g0250 319 ProSiteProfiles Myb-like domain profile. 16 62 IPR001005 -
Lele01g0250 319 CDD SANT 19 60 IPR001005 -
Lele01g0250 319 MobiDBLite consensus disorder prediction 1 21 - -
Lele01g0250 319 Gene3D - 69 137 - -
Lele01g0250 319 Gene3D - 16 67 - -
Lele01g0250 319 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele01g0250 319 SMART sant 67 115 IPR001005 -
Lele01g0250 319 SMART sant 15 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0250 Lele-ChrLele01 1417644 1420447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0250 14 123 MYB Transcription Factor Family AT1G17950 81.818 2.12e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele01g0250 Myb_DNA-binding 1.8e-15 CL0123