Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0248 ATGTGCATGACAGATTCTTGCTCCAGTGACAGTTATGACAAGTACTTCCATGATTCACCCACAGAAGAACTGATAGAACCATCTAGTTCTGGGGTCTCAAGCAATTCATGTCGCCCGGACGATGCTTCTCCTTACCAGCCTAGAGCTAGTTCAGGAGCTTCTATGGTTGCTAATAACCCATTTGATACTTCTTTCAGGTCCACGAGGCGTCATGTTGATGCTTATTATCAATCCAATTTTAGGTCAAATTTCTCAGAAAGTGAAAGCCTGGATGCACTTGACTTCAATGGTCAAATGAGATTAAAACTGCAAGAATTAGAGAGGGTCCTGCTTGATGATGAAGAAGACATATTTGAGACTTCTCAAAGCATGGAAATTGACCCTGAGTGGGCTGATCCCATTCAGAACATGCAGCTCCATGACTCACCAAAGGATTCTTCATCCTCAGATTCTAATCTCAGCAGCATCAGTTGCAACAAAGAAGTATCACATATCTCTCATCGGAGCCCCAGGCAAATGCTTCTTGAATGTGCAGGTGTACTTTCAGAAGGAAATTTAAAGGAGGCGTCGGATATGATAAATAATCTCCGGAAGATGGTCTCAATTCAGGGAGATCCTCCCCAAAGAATTGCAGCCTATATGGTTGAAGGACTTGCAGCTCGCCTGGCTGAGTCCGGCAAGGGTATTTACAGAGCTCTGAAATGCAAGGAGCCTCCTTCTTCAGAACGTCTGGCAGCAATGCAGATATTGTTTGAAGTGTGCCCATGTTTTAAATTTGGATTCATTGCTGCAAATGGTGCAATCACAGAGGCAGTGAAAGATGAAACCCAGGTGCACATAGTAGATTTTGACATCAACCAAGGAAGCCAATACATAAGTCTACTACAAACACTTGCTTCAAGGCCAGGCAAGCCACCCCACGTCAGATTGACTGGAGTTGATGATCCAGAATCTGTACAACGATCTGTTGGAGGCCTTAAGATCATAGGACAGAGACTTGAGAAGCTAGCAGAAGCACTGGAGCTTCCATTTAAGTTTCGAGCCGTGCCGTCGAGGACATCCCTTGTCACCCCTTCAATACTCAAATGTCGGCCTGGTGAAGCCCTTGTGGTGAACTTCGCATTTCAGCTGCACCACATGCCGGATGAGAGTGTTTCCACAGTGAACGAGAGAGATCAACTCCTCCGCATGGTTAAGAGCCTAAGTCCAAAACTTGTAACAGTTGTGGAACAAGATGTGAACACTAACACAACCCCTTTCTTTCCAAGATTCGTAGAAGCTTACAATTATTACTCTGCTGTTTTCGAGTCGCTTGATGCGACTCTTCCCAGGGAGAGCCAGGACCGGATGAATGTTGAAAGGCAATGCTTGGCAAGGGACATTGTCAACATTGTTGCATGTGATGGCGAGGATCGGATTGAAAGGTATGAAGTTGCCGGGAAATGGAGGGCGAGAATGGCCATGGCTGGCTTCACTTCATCTTCACTGAGCAATCACGTGACTGAGTCAATTCGGAAGCTCATCAGGCAGTATTGTGAGAGATACAAAATGAAGGAGCAAATGGGTGCACTCCATTTTGGGTGGGAAGACAAGAACTTGATTGTAGCTTCGGCGTGGAGGTGA 1623 0.4572 MCMTDSCSSDSYDKYFHDSPTEELIEPSSSGVSSNSCRPDDASPYQPRASSGASMVANNPFDTSFRSTRRHVDAYYQSNFRSNFSESESLDALDFNGQMRLKLQELERVLLDDEEDIFETSQSMEIDPEWADPIQNMQLHDSPKDSSSSDSNLSSISCNKEVSHISHRSPRQMLLECAGVLSEGNLKEASDMINNLRKMVSIQGDPPQRIAAYMVEGLAARLAESGKGIYRALKCKEPPSSERLAAMQILFEVCPCFKFGFIAANGAITEAVKDETQVHIVDFDINQGSQYISLLQTLASRPGKPPHVRLTGVDDPESVQRSVGGLKIIGQRLEKLAEALELPFKFRAVPSRTSLVTPSILKCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLSPKLVTVVEQDVNTNTTPFFPRFVEAYNYYSAVFESLDATLPRESQDRMNVERQCLARDIVNIVACDGEDRIERYEVAGKWRARMAMAGFTSSSLSNHVTESIRKLIRQYCERYKMKEQMGALHFGWEDKNLIVASAWR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0248 540 MobiDBLite consensus disorder prediction 23 57 - -
Lele01g0248 540 Pfam GRAS domain family 171 540 IPR005202 -
Lele01g0248 540 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 143 535 IPR005202 -
Lele01g0248 540 MobiDBLite consensus disorder prediction 18 57 - -
Lele01g0248 540 MobiDBLite consensus disorder prediction 139 155 - -
Lele01g0248 540 MobiDBLite consensus disorder prediction 136 155 - -
Lele01g0248 540 ProSiteProfiles GRAS family profile. 161 540 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0248 Lele-ChrLele01 1406450 1408072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0248 2 540 GRAS Transcription Factor Family AT1G21450 64.457 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele01g0248 GRAS 1.9e-135 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0215 25 1275162 1276901 Lele01g0248 01 1406450 1408072 CCT
Lele01g0248 01 1406450 1408072 Lele01g0248 01 1406450 1408072 ECH
Lele01g0248 01 1406450 1408072 Lele03g0255 03 1388441 1391637 hybridization
Lele01g0248 01 1406450 1408072 Lele04g0246 04 1462350 1463975 hybridization