Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0245 ATGGTACCCCCGGGACCACCCACTCCGATTGGTGGTGCCCAGTCTGTCTCACCCTCCCTTCTGAGATCTAATTCTGGAATGTTGGGAGCTCAAGGGGGTCCGATGCCTTCACAGTCTTCTTTTCCCTCGCTCGTGTCACCGCGGAATCAGTTTAACAACATGAACATGCTAGGAAATATGTCCAATGTATCTTCCATGCTGAATCAGTCTTTCCCAAATGGGGTTCCAAATTCTGCACTCTCTGGTCCAGGAAGTAGCCAGCGAGGAGGCATTGATACCGGAGCTAAAACAGATCCTCTTTCCAGTGTTGGCAATGGAATGAGCTTCAATAATAACTCATCCTCGTTTGTACAATCAAATATGGTGAATCCTGGTCCATCTGGTCAAGGTCAGGTTCAACAATTTTCAAATCCTTCTGGTAACCAAATGTTGCCAGATCAACAGCATTCCCAACAACTTGACACTCAAAATTTCCAACACAGTCAACAGTCATTGCAACAGTTCTCAGCTCCTCTGAACTCTCAGCAACAACAGCAGCAGCAACATTTTCAATCAATTCGAGGAGGGATAGCTGGCATAGGACCTGTTAAATTGGAGCCCCAAGTAAACAACGATCAACTTGGGCAGCAGCAGCAGCAGCAGATGCAATCATTGAGGAATCTTGCACCAGTGAAGTTGGAACCTCAACAAATGCAAACAATGAGATCTATGGCTCCAGTAAAAATGGAGCCCCAGCATTCTGACCAGTCATTATTTTTGCATCAACAGCAACAGCAGCAGCAGCAGCAACAATACCTCCACATGTCAATGAAACCCTCTCAGGCTACTGCTGCTCAGATTAATCTATTGCACCACCAGAGACTGTTGCAGTTACAACAGCACCAACAACAACAACTCTTGAAGGCAATGCCTCAACAACGGCCACAACTACAACAGCAGTTTCAACAGCAGAACATGCCTATAAGGACTTCCGGAAAGCCAGTTTATGAACCTGGAATGTGCGCTAGGCGGCTGACGCATTACATGTATCAGCAACAGCATAGACCTGAAGATAACAACATTGAGTTCTGGAGGAAATTTGTTGCTGAATATTTTGCTCCTAATGCCAAAAAGAAGTGGTGCGTTTCTATGTATGGTAGCGGCAGACATGCAACTGGGGTTTTTCCTCAGGACGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTACTTCCCAGGCTCTTCAAAATAAAGTATGAAAGTGGCACTTTGGAAGAGCTACTTTACGTAGACATGCCTCGCGAGTATCATAATTCCTCTGGTCAGATTGTTCTGGACTATGCGAAAGCAATACAAGAAAGTGTTTTTGAGCAACTCCGTGTTGTTCGTGATGGTCAACTTCGGATAATTTTTTCTCCAGACCTGAAGATATGTTCTTGGGAATTTTGTGCTCGGCGTCATGAGGAGCTTATCCCAAGAAGACTGTTAATACCTCAGGTTAGTCAGCTTGGAACTGCTGCTCAAAAATACCAGGCTTTTACTCAGAATGCAACACCTAATTTATCTGTTCCTGAGTTAGAAAATAATTGCAATATGTTTGTTGCATCCGCGCGTCAGTTAGCAAAAGCCCTAGAGGTGCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCCGAGAAAAAGGGATTGGACCTATGGAAAGTTTGGCCAAATATCCTCGGAGAACTACTAGTTCATCTGGAGTCAATAGTCAAGCTCAGCAACTGCCTGAAGATCAATTACAGCAGCAACAGCAACAGCAACAACAAATGGTGGCCCAAAACTCAAATGGTGATCAAAACTCGATGCAACCTGCTGCTGTGCAAATAGCTTCTAGCAATGGAGTGGCTGGTGTAAATAGCTGTATCAACTCGGTATCTGCATCAACTACCCCAAGTACTATTGTTGGACTTCTCCACCAGAACTCTATGAATTCTAGACAACAGAATTCCATGAACAATGCCAGCAGTCCGTATGGAGGTAGTTCTGTTCAGATTCCATCCCCAGGTTCGTCCAGTACTGTGCCACCAGCACAGCCAAACACGTCACCCTTTCAAGGTCCTACACCATCATCATCTAGCAATCCACCACAAACTTCTCACTCATCTTTAGCAGCCGGCAATCACATGAATTCATCTAATTCACCAGCTAATGTTTCCTTGCAACAACAACAGTCATCCCTTTCTGGTGAAGCTGACCCCAGAGATGCTCAGAGTTCAGTTCAAAAAATCTTATCAGGGATATACACCCAAAATAATGGCACTGGCGGAATGGTAGGTGTCGGCTCTTTTGGAAATGATGTCAAGAATGTGAATGGGATTATGCCAGTAAGTAGCAACACAGGTCTCAATAGTGGCAACTGCCTGCCTGGCAATGGGCCTGTGAATGGTAATTCAGGTGTTGGGGTTGGTGGATATGGTACGATGGGCGGTGGGCTCGGTCAATCTGCTATGGTCAATGGGATCAGAGCCGCGATGGGAAATAACTCTATTATGAATGGGAGGGGAGGAATGGCAACTATTGCTCGAGACCAAGCTATGAATCATCAACAAGATTTGTCAAACCAACTACTTAGTGGACTAGGAGCAGTAAATAGTTTTAATAATCTTCAATTTGATTGGAAAGCTTCCCCATGA 2742 0.4468 MVPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPMPSQSSFPSLVSPRNQFNNMNMLGNMSNVSSMLNQSFPNGVPNSALSGPGSSQRGGIDTGAKTDPLSSVGNGMSFNNNSSSFVQSNMVNPGPSGQGQVQQFSNPSGNQMLPDQQHSQQLDTQNFQHSQQSLQQFSAPLNSQQQQQQQHFQSIRGGIAGIGPVKLEPQVNNDQLGQQQQQQMQSLRNLAPVKLEPQQMQTMRSMAPVKMEPQHSDQSLFLHQQQQQQQQQQYLHMSMKPSQATAAQINLLHHQRLLQLQQHQQQQLLKAMPQQRPQLQQQFQQQNMPIRTSGKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRHATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIIFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGTAAQKYQAFTQNATPNLSVPELENNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSREKGIGPMESLAKYPRRTTSSSGVNSQAQQLPEDQLQQQQQQQQQMVAQNSNGDQNSMQPAAVQIASSNGVAGVNSCINSVSASTTPSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSTVPPAQPNTSPFQGPTPSSSSNPPQTSHSSLAAGNHMNSSNSPANVSLQQQQSSLSGEADPRDAQSSVQKILSGIYTQNNGTGGMVGVGSFGNDVKNVNGIMPVSSNTGLNSGNCLPGNGPVNGNSGVGVGGYGTMGGGLGQSAMVNGIRAAMGNNSIMNGRGGMATIARDQAMNHQQDLSNQLLSGLGAVNSFNNLQFDWKASP 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0245 913 Pfam LIM-domain binding protein 337 591 IPR029005 -
Lele01g0245 913 MobiDBLite consensus disorder prediction 12 47 - -
Lele01g0245 913 PANTHER LIM DOMAIN-BINDING PROTEIN 207 902 IPR029005 -
Lele01g0245 913 MobiDBLite consensus disorder prediction 595 639 - -
Lele01g0245 913 MobiDBLite consensus disorder prediction 681 775 - -
Lele01g0245 913 MobiDBLite consensus disorder prediction 1 47 - -
Lele01g0245 913 MobiDBLite consensus disorder prediction 68 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0245 Lele-ChrLele01 1392291 1398594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0245 1 911 C2H2 Transcription Factor Family AT1G43850 61.352 0.0 783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0245 01 1392291 1398594 Lele01g0245 01 1392291 1398594 ECH
Lele01g0245 01 1392291 1398594 Lele03g0252 03 1374174 1380452 hybridization
Lele01g0245 01 1392291 1398594 Lele04g0243 04 1442588 1449662 hybridization