Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0224 ATGGGAAACAGACTGGAATCGTTGTTCTTGTTCTCAACAGCCCTCACGATTGGAGCAATGTTCTTTCGTGTTGGAGCCGAGCCGGTGGGAGATAGAGGAGCCTTGCTTCACTTCCTCCACAACATAAACCACTCTCTTGCTCTAAACTGGGATGAGAAATCTTCTGTATGCAATAGCTGGAGAGGAATCACCTGCGATGTAGACCATTCCAGAGTCATAGCCCTTCATTTACCTGCAGTTGGATTGAGCGGTCCAATACCACCGAAGACCCTAAGTCGCCTCTCAGCACTTCAGATTCTGAATCTAACATCCAATAGCATAACGGGTCCTTTTCCTTCTGGTTTCTCTGAGCTTAAGGATTTGACTTATCTTAACATTCAGTTCAACGAGTTTTCTGGCCCATTGCCATCAGATTTCTCAGTTTGGAAGAACTTGACCGTTGCTGATTTATCCAACAATTTTTTTAATGGGAGCATTCCTTCATCAATTTCGAATCTCATTCATCTCACATCTTTAGTCCTGGCAAACAACTCGCTTTCGGGTGAAATTCCTGATATCAATATTCCTACCCTGCAAGAGGTGACTTTGGTCAACAATAACCTTAGTGGGATGGTGCCCAAATCCCTCGTAAGATTCCCAGGTTGGGCATTTTCAGGGAACAATCTTTCATTTGCAAATGCTCTACCAAGAAAGAGAAACTCAAAAAGACTTGGTAAGTCTGCATTAATAGGTGTTATTCTAGGTTGTACTGGGCTGGCATTCGGAGTTGTTGCAGCTTTCTTGCTTTTGTGCTACTACGATAAAGGAGGTGAAAATGGGCTGGCAATGAAATACCAGAAGAAAGACATGTTTCTGAAAAAGGATATCTCTGAGAGTCATTGCAGAAAAAACAAAATTGAGTTCTTTGAGGATTGCAATTTCGCGTTTGACCTGGAGGATCTGTTGAGAGCATCTGCTGAGGTGCTTGGTAAAAGAGGGGAAGAAAGGATTTATTTAGATTGGGATAGCAGACTGAGGATAGTAATAGGTGCAGCAAGAGGCATTGCTCACGTCCATGCTCAACAAGGAGCAAAACTCGTCCATGGAAACATAAAAGCCTCCAACATCTTCCTTAACGCAGAAGGGTATGGCTGTATTTCTGATATTGGTTTAGCAACACTAATGAGTCCAATACTGCCACCGTCTCTAAGAAGTTCCGGCTACCGTGCTCCAGAAGTAACAGACCCCAAAAAAGCAAGTCACGCGTCTGATGTCTACAGTTTTGGAGTGTTTCTGTTGGAGCTTTTGACCGGAAAAGGCCCCATGCACGCCGCAGGAAGTGAGGAGGCCATCCACCTGGTTAGGTGGGTGAATTCTGTGGTCAGAGAGGAATGGACAGCTGAAGTATTCGATGTACAATTGCTGAGATTTCCAAATATAGAGGAAGAAATGGTACAAATGTTACAGCTTGCGATGGCATGTGTTGTTAGAGTTCCAAAGCAGAGACCAAAAATGTCGGATGTTTTAAGAATGATGGAGGAAATTCTTCGACCAAATACTGAGAATCGGCTGTCGTCTGGGTCCAGATCAGCGGCTTCTACCCCAACACCACCAGCAATTGACGTACCTTCTTCCTCCGTGGATGCTAAGAATTAA 1635 0.4416 MGNRLESLFLFSTALTIGAMFFRVGAEPVGDRGALLHFLHNINHSLALNWDEKSSVCNSWRGITCDVDHSRVIALHLPAVGLSGPIPPKTLSRLSALQILNLTSNSITGPFPSGFSELKDLTYLNIQFNEFSGPLPSDFSVWKNLTVADLSNNFFNGSIPSSISNLIHLTSLVLANNSLSGEIPDINIPTLQEVTLVNNNLSGMVPKSLVRFPGWAFSGNNLSFANALPRKRNSKRLGKSALIGVILGCTGLAFGVVAAFLLLCYYDKGGENGLAMKYQKKDMFLKKDISESHCRKNKIEFFEDCNFAFDLEDLLRASAEVLGKRGEERIYLDWDSRLRIVIGAARGIAHVHAQQGAKLVHGNIKASNIFLNAEGYGCISDIGLATLMSPILPPSLRSSGYRAPEVTDPKKASHASDVYSFGVFLLELLTGKGPMHAAGSEEAIHLVRWVNSVVREEWTAEVFDVQLLRFPNIEEEMVQMLQLAMACVVRVPKQRPKMSDVLRMMEEILRPNTENRLSSGSRSAASTPTPPAIDVPSSSVDAKN 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0224 544 MobiDBLite consensus disorder prediction 512 534 - -
Lele01g0224 544 Gene3D Ribonuclease Inhibitor 31 141 IPR032675 -
Lele01g0224 544 SUPERFAMILY Protein kinase-like (PK-like) 327 516 IPR011009 -
Lele01g0224 544 MobiDBLite consensus disorder prediction 512 544 - -
Lele01g0224 544 FunFam Probable inactive receptor kinase RLK902 29 187 - -
Lele01g0224 544 Gene3D Ribonuclease Inhibitor 142 239 IPR032675 -
Lele01g0224 544 SUPERFAMILY L domain-like 41 211 - -
Lele01g0224 544 PANTHER OS05G0588300 PROTEIN 15 324 - -
Lele01g0224 544 ProSiteProfiles Protein kinase domain profile. 191 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0224 544 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Lele01g0224 544 Pfam Leucine rich repeat 86 130 IPR001611 GO:0005515
Lele01g0224 544 Gene3D Transferase(Phosphotransferase) domain 1 310 525 - -
Lele01g0224 544 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 311 519 - -
Lele01g0224 544 Pfam Protein kinase domain 339 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0224 Lele-ChrLele01 1283092 1285353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0224 8 324 Receptor kinase-like Gene Family AT5G24100 46.199 1.56e-88 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele01g0224 Pkinase 5.4e-19 CL0016