LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele01g0221	ATGTCGTTGGCCGTGCTGGACGCTCTTGACTCGGCTCGCACGCAATGGTACCACGTGACAGCCATAGTGATCGCCGGCATGGGCTTCTTCACCGATGCCTATGACCTCTTTTGCATCTCAACCGTTTCTAAATTGTTGGGCCGTCTCTACTACTTCGACCCCACCTCCGCTAAACCTGGGAAGCTCCCCCCTCACGTCAACAACACCGTCATCGGCACCGCCCTCATCGGAACCCTCTTCGGCCAGCTAGTCTTCGGGTGGCTCGGAGACAAGCTTGGGCGCAAGAAAGTCTATGGCATCACTCTCATTCTCATGGTCGTTTGCGCCATATGTTCCGGCCTCTCCTTCGGTTCTTCGGCCCATTCCGTGATGAACACCCTCTGCTTCTTCAGATTCTGGCTGGGCTTTGGTATTGGTGGTGACTACCCTCTATCTGCAACCATCATGTCCGAATACGCTAACAAAAGTACCCGCGGGGCTTTCATCGCAGCCGTTTTCGCCATGCAAGGCGTTGGAATTATATTTGGTGGCTTGGTCGCCATGGGGTTATCCTACGTTTTCTTGTCAAACAACCCCGCCCCAACATATAACGAGAACAAAATCTTATCGACCCAGCCCGCAGGCGACTACCTGTGGAGATTAGTTCTTATGGTCGGAGCCGTTCCGGCGGCGTTGACGTTCTACTGGCGAATGAAGATGCCGGAAACGGGGCGCTACACGGCTCTAATAGAAGGTAATGCAAAACAAGCGGCCACCGACATGGCAAGGGTTTTGGACATCGAAATCCAAGCAGAGCAGGAGAGGATAGCTCACTTCAAAGCTGCCAACGAGTATTCACTATGGTCTAACGAGTTCTTTGCGAGACACGGGCGCCATTTGATCGGAACCATGAGCACGTGGTTCTTGTTGGACATTGCTTTTTACAGCCAGAATTTAACCCAGAAGGATATTTTCCCAACGATGGGCTTAGTCCACAAGGAGCCTGATATGAATGCTTTGCGGGAAGTGTACGAGACGTCACGTGCCATGTTCGTGATTGCCCTGCTCGGGACGTTCCCGGGGTATTGGTTCACCGTGGCTTTCATTGAAAAGCTGGGGCGTTTCAAGATCCAACTGATCGGCTTCTTCATGATGTCGTTTTTCATGTTCGTGATTAGTGTGAAATACGAAGCCATGAAGAGTCACAAATACCTGTTCGCTTTGCTGTATGGGCTCACGTTTTTCTTCGCCAACTTCGGGCCCAACAGCACTACGTTCGTGCTGCCGGCGGAGCTGTTCCCAACAAGGGTGAGGTCCACGTGTCACGCGCTGAGCGCGGCGTCGGGCAAAGCGGGGGCGCTGGTGGCGGCGTTTGGACTGCAGAATTTCACGCAGGGTGAGGACGTGGGGAAAATAAAGACGGCAATGAAGATACTGGCGGTGACCAACTTTTTGGGGTTCTGCTTCTCCTTCCTGTTGACCGAAACAAAAGGGCGGTCTCTTGAGGAAATCTCCGGAGAGGACGGGAGAGAAGCCGAGCCCACACCGTCAAAGAATAGCAGGGTGGTCACTCGCCAGCAGGGACCTCACTCCGAGACTTTTACCAAGGATTGA	1593	0.533	MSLAVLDALDSARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPTSAKPGKLPPHVNNTVIGTALIGTLFGQLVFGWLGDKLGRKKVYGITLILMVVCAICSGLSFGSSAHSVMNTLCFFRFWLGFGIGGDYPLSATIMSEYANKSTRGAFIAAVFAMQGVGIIFGGLVAMGLSYVFLSNNPAPTYNENKILSTQPAGDYLWRLVLMVGAVPAALTFYWRMKMPETGRYTALIEGNAKQAATDMARVLDIEIQAEQERIAHFKAANEYSLWSNEFFARHGRHLIGTMSTWFLLDIAFYSQNLTQKDIFPTMGLVHKEPDMNALREVYETSRAMFVIALLGTFPGYWFTVAFIEKLGRFKIQLIGFFMMSFFMFVISVKYEAMKSHKYLFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGALVAAFGLQNFTQGEDVGKIKTAMKILAVTNFLGFCFSFLLTETKGRSLEEISGEDGREAEPTPSKNSRVVTRQQGPHSETFTKD	530

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele01g0221	530	MobiDBLite	consensus disorder prediction	495	530	-	-
	Lele01g0221	530	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	17	495	-	-
	Lele01g0221	530	Pfam	Sugar (and other) transporter	22	498	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Lele01g0221	530	FunFam	Inorganic phosphate transporter 1-6	17	512	-	-
	Lele01g0221	530	TIGRFAM	2A0109: phosphate:H+ symporter	6	500	IPR004738	GO:0005315\|GO:0006817\|GO:0016020
	Lele01g0221	530	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	21	491	IPR020846	GO:0022857
	Lele01g0221	530	CDD	MFS_PhT	22	490	-	-
	Lele01g0221	530	Gene3D	MFS general substrate transporter like domains	17	515	IPR036259	-
	Lele01g0221	530	SUPERFAMILY	MFS general substrate transporter	9	498	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele01g0221	Lele-ChrLele01	1261652	1263244	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele01g0221	2	500	Inorganic Solute Cotransporters	AT5G43360	62.891	0.0	662