Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0215 ATGGGTCAGCGGTTGAATCCTGTGATTTGCTCTGACCAAAGACCAGCCAGTCCCACTGCCTCTGGCTTTCATTCAACTCCATTGGTCAACCCGCCGCGTCTGTTTGCCCTTTATATCTCAACCTCCCCTGCTTTTCATCTTCTACCTTACTCCTACTCTTCGGCTATCATCTCCCTGGCCAGAACCATGGGAGATTCGGCCTCACATAACCTCATAAACGAATTGCTCCAAGGCAGGGACCTTGCAAGACACCTCCAAATGTGTCTGAACGCGCCCTCCACTTCCCCTGAATCCCCTGACATGTTGATCTGTCGCATCATTGCCACATTCGACAAGGCTCTCGCTCTTCTCAACTGCTCCGCCAAACACTCCGCCGGGCTTCTGGCCGATTCACCTCCTCTCACTCCTCGCACCGAAGACCCTCACAAGGATTTCCAGCTCCAACACCAGTATATGAACACGTCGGCAAGATGGACCAAACAGATTCGAATTAGCCCGGGTATGGCCGTCGAGTCCCTTCTGGACGATGGATTCAGCTGGAGGAAATATGGCCAGAAAGACATTCTTGGAGCCAAATTCCCCAGAGGATACTATAGATGCACCCATAGACACGCGCAAGGGTGCTTGGCCACAAAGCAAGTGCAGCGATCCGACGAAGACCCGGCGGTCATGGAAGTCAATTACAGGGGAAACCACACCTGCAAGCTCGCCTCCAGCCCCAGCCCCAGCCCTGTTCCTCCGTCACAAGAACAAGTCGTGGACCTACGTGCAGGCCTAAGGGTGCTGACGGAGAATTTAAATGCTTCTGACCAAACCTCTTTTGCTTCATCCCTATTGCCTTCGACTTCCAAAGTGAGACCCGACAACCCCGACTCGGTGTGTCCTGCCATCGAAAACAACGTTGTTCAAACCTTAAGTTCTCCTCCCTACATGTCCCCTGCCACCTCTGAAACAGCCCAAATTTCGGTGTCCCCAAGAGGGGTTAGTAGCTTTGGATGGCACCTTAATTTGCCTGCTCCTACCTCTGACATCAACGACGCCATCTCTCCGGCGGGAGCTCCCACCGTCGCCTCCGAGTTTCCATTATTTGACCACTTCGAATTTGAAGGCCACGGCTTCACATTTCACAACCCACGATACTTTTAA 1146 0.5288 MGQRLNPVICSDQRPASPTASGFHSTPLVNPPRLFALYISTSPAFHLLPYSYSSAIISLARTMGDSASHNLINELLQGRDLARHLQMCLNAPSTSPESPDMLICRIIATFDKALALLNCSAKHSAGLLADSPPLTPRTEDPHKDFQLQHQYMNTSARWTKQIRISPGMAVESLLDDGFSWRKYGQKDILGAKFPRGYYRCTHRHAQGCLATKQVQRSDEDPAVMEVNYRGNHTCKLASSPSPSPVPPSQEQVVDLRAGLRVLTENLNASDQTSFASSLLPSTSKVRPDNPDSVCPAIENNVVQTLSSPPYMSPATSETAQISVSPRGVSSFGWHLNLPAPTSDINDAISPAGAPTVASEFPLFDHFEFEGHGFTFHNPRYF 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0215 381 MobiDBLite consensus disorder prediction 1 24 - -
Lele01g0215 381 Pfam WRKY DNA -binding domain 175 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g0215 381 ProSiteProfiles WRKY domain profile. 169 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g0215 381 SMART WRKY_cls 174 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g0215 381 MobiDBLite consensus disorder prediction 10 24 - -
Lele01g0215 381 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 68 315 IPR044810 GO:0003700
Lele01g0215 381 SUPERFAMILY WRKY DNA-binding domain 172 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele01g0215 381 FunFam WRKY transcription factor 53 160 237 - -
Lele01g0215 381 Gene3D WRKY domain 166 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0215 Lele-ChrLele01 1226882 1228208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0215 70 239 WRKY Transcription Factor Family AT5G24110 43.860 6.01e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele01g0215 WRKY 3.7e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0215 01 1226882 1228208 Lele03g0221 03 1203012 1204332 hybridization
Lele01g0215 01 1226882 1228208 Lele44g0192 44 1217987 1219713 hybridization