Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0212 ATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAACTGGCAGAAAGGAAATTTTCAGAAAGGGAATATGCTAGTGCAAAGAAGCTTGCCCTCAAGGCTCTAAATCTGTGTCCTACACTGGATGGTATCTCTCAGTTTTTGACTACTCTTGATGTTTATATCTCTGCCGAGAACAAAGTAAGTGGAGAAGTGGATTGGTATGGTATACTTAAAGTGAACCCCTGCGCTGATGATGAAACAGTTAGAAAACATTACAGGAAGCTGGCTCTTACTCTTCACCCTGACACAAATAAGTCTTTAGGCGCAGAAGGTGCTTTTAAGCTGGTTTCAGAGGCGTGGAGTATGTTATCAGATAAGGACAAGAGACCAGCATATGAGCATAATAGGAGTATGAAAGGATTTCAACATGAGGCTCCCAACCATGTCAGATCTCAGTCAGAAGCACCATTTTCAAATGGTTTTAATAATTTCAACAAGAATGTGACTGCAAATGTGAGGAATGGAAATAATAATACTCGTTTACAACCCGCCTCAGTTCCTCCTCCACAGAAAAAGGCTAGTACCTTCTGGACAATCTGTAACCAGTGCAAGACACATTATGAATATCTCAAGATCTATTTGAATCATACCCTTATTTGTCCCACCTGTAACGAGCCTTTCTTGGCTGTAGATATGCCTCCACCTCCCAATATCTTCAAGTCTGCAAATCGGTCTTCTAGTCAACAGTGTCAGAATTCTCAACAACATGCTGCAGGGAATAATGTTGCTGCTCAAGCAGCAAATGTTGTGCAGAAGGCAGGTGAGAAAGTGGCAAAAGATTATGAGAGAGCACCATCAATTACTGAATGGGAGAGGAGTCAGATGTCAAAGAAAGGTTCCTTTAATAAGGTAGAAAAGACATCGAAGAAGAGGAGGACAGATGAGATTCGCATTAATGGCGATCTAGGATACATGACTAATCATATGGCCATGGGACATCGGGTTGCAGGATTTTCCGGTATTACCAGCAAGCCCCACAGCATGAGAGAATTAGGCATGTTTGAAATACGGAACATGTTGATGCATAAGGCTCGAAGCGACATTCGTAGGAAAGTTCAAGAATGGAGATCAACAGCTGAAGCTAAGAATACCAAGAAGCACAAACAGAACAAAAGAACCAAAGGCACATTGAATGACAAAACACCTGATGGGGAGCAGCGTGGTGAGACCGCTCTTAATGGTAACCAGTATCTGGACAGCGATTCTATTAAGGCGGACCAAGTCTTTATAACGATCAATGTTCCAGACTCGGATTTTCACAATTTTGACTTGGATAGAAATGAAAATTCTTTTGAAGAGGACCAGGTCTGGGCTGCTTATGACGATGATGATGGGATGCCTCGGTATTATGCTCGAATCCACAAAGTGACCTCCTTGAAGCCGTTTAAGATGCGGATCAGTTGGCTTAACTCTCGAAGCAATAGTGAACTGGGTCCAATAGATTGGATAGGTTCTGGTTTTTACAAAACTTGTGGGGATTTCAGAACTGGCAAGCATGAAATAACTGAATCATTAAATTCATTTTCGCACAAGGTTAAATGGACAAAAGGCACCAGAGGAGTTGTTCGCATTTTACCTGGAAAGGGGGAAGTTTGGGCTCTTTATAGAAACTGGTCTCCAGATTGGAACCAACGTACTCCAAATGAAGTTATACACAAGTATGACATGGTAGAGGTGGTTGAAGATTTTGACGAAGATCAAGGTGTAGTAGTTAGACCACTTATTAAGATTGCTGGATTTAGGACCGTGTTTGATAGGCATGGAGACCCCCACTGGTTGATGAGGATTGCTAAAGAAGAGCTGTTTCGTTTCTCTCATCAGGTTCCTTATTACTTGCTTACAGGACAAGAAGCTCATAATGCCCCAAAAGGCTGTCGAGAGTTGGATCCCGCAGCCACTCCTCTCGACCTCCTGCAGGATATAACGGAAGCAAATGAGGCAACATCCGATAATGTTGGAAAACGTAAGGAAGACACATTGCGTAGTTAA 2031 0.4254 MECNKDEAVRAKELAERKFSEREYASAKKLALKALNLCPTLDGISQFLTTLDVYISAENKVSGEVDWYGILKVNPCADDETVRKHYRKLALTLHPDTNKSLGAEGAFKLVSEAWSMLSDKDKRPAYEHNRSMKGFQHEAPNHVRSQSEAPFSNGFNNFNKNVTANVRNGNNNTRLQPASVPPPQKKASTFWTICNQCKTHYEYLKIYLNHTLICPTCNEPFLAVDMPPPPNIFKSANRSSSQQCQNSQQHAAGNNVAAQAANVVQKAGEKVAKDYERAPSITEWERSQMSKKGSFNKVEKTSKKRRTDEIRINGDLGYMTNHMAMGHRVAGFSGITSKPHSMRELGMFEIRNMLMHKARSDIRRKVQEWRSTAEAKNTKKHKQNKRTKGTLNDKTPDGEQRGETALNGNQYLDSDSIKADQVFITINVPDSDFHNFDLDRNENSFEEDQVWAAYDDDDGMPRYYARIHKVTSLKPFKMRISWLNSRSNSELGPIDWIGSGFYKTCGDFRTGKHEITESLNSFSHKVKWTKGTRGVVRILPGKGEVWALYRNWSPDWNQRTPNEVIHKYDMVEVVEDFDEDQGVVVRPLIKIAGFRTVFDRHGDPHWLMRIAKEELFRFSHQVPYYLLTGQEAHNAPKGCRELDPAATPLDLLQDITEANEATSDNVGKRKEDTLRS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0212 676 MobiDBLite consensus disorder prediction 286 305 - -
Lele01g0212 676 Pfam Domain of unknown function (DUF3444) 426 631 IPR024593 -
Lele01g0212 676 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lele01g0212 676 SMART dnaj_3 65 122 IPR001623 -
Lele01g0212 676 MobiDBLite consensus disorder prediction 657 676 - -
Lele01g0212 676 CDD DnaJ 66 119 IPR001623 -
Lele01g0212 676 Gene3D DnaJ domain 64 172 IPR036869 -
Lele01g0212 676 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lele01g0212 676 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
Lele01g0212 676 Pfam DnaJ domain 66 127 IPR001623 -
Lele01g0212 676 MobiDBLite consensus disorder prediction 290 305 - -
Lele01g0212 676 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lele01g0212 676 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lele01g0212 676 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lele01g0212 676 MobiDBLite consensus disorder prediction 369 405 - -
Lele01g0212 676 PANTHER BNAC03G44070D PROTEIN 1 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0212 Lele-ChrLele01 1195704 1197734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0212 4 233 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.966 1.54e-25 107