Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0208 ATGTTGGTTGGAACCATTGGTCTGGACTTCCAAACCGCAACCACTGGTCAGGAAATACAGATAACAATGGAGAAGGATGGCTACTACATATATGTATATATTCAATTAATCTCTCCTATTCCCATAGTTGACTTGTCAAACGTTTGGGCTTCACCTCGAGCTTCACAGTTTCCTTCTTGGTTCAACAACGATGCGGCTCTCAATTCTTGCTGGTTGATATTGCTGATCACGCCATCGCTGGAACTTACCAGCAGTAGTGATGGGTGCAGAGAATCAAGATGTGGACGCCATGGCCCTCCAATTCGGTTTCCCTTCCAACGTAATCACATTGATCCAGATTCCCGTGGCTATCCTTGGTTTGATCTCACTTGTCATGAACATCACACGCTGGTTGAGATTCCTGCAGTTCCACTTCCAATTCAATTTAGGGTTAATCATATAAATTACAATTATCGGTATGTGTCCATATCTGACCCAAAAAATTGCCTTCCCAGGAAGCTTCTGAAGCTTAACCATACTTCAATTTCTCCTTTCCAATCTACATCGTCTCCACTTAAATCAGATCGATCCAACACCTATTAA 582 0.4261 MLVGTIGLDFQTATTGQEIQITMEKDGYYIYVYIQLISPIPIVDLSNVWASPRASQFPSWFNNDAALNSCWLILLITPSLELTSSSDGCRESRCGRHGPPIRFPFQRNHIDPDSRGYPWFDLTCHEHHTLVEIPAVPLPIQFRVNHINYNYRYVSISDPKNCLPRKLLKLNHTSISPFQSTSSPLKSDRSNTY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0208 193 Pfam Wall-associated receptor kinase galacturonan-binding 89 158 IPR025287 GO:0030247
Lele01g0208 193 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 73 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0208 Lele-ChrLele01 1184931 1185610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0208 89 180 C3H Transcription Factor Family AT2G46495 37.234 2.21e-08 51.2