Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0207 ATGTCTAGTTCCCTTTCCTTTATACAACTTCCGACTCGCTCTTCTTGCGCTCTTCCCTCCATTAACAACCCTCAACTCAATGCACGCCCTTCAAATAAACTCGGTGGCAGAGCCACGCTATACTCAGCCACAAGGAAATCATCATGCTTGGTTCAGAAGAACATTTTCGGAAGCCGATTGCGTCCGTGCAGGGCGCCGGGATCGGTAAAACTACACGTTTGGAAATCAGACGGTCCTGGGAGTTCGCCCAAGCTGAGGGTGGTTGTTCGATCGGCATTGTCGGCGGTGCCGGATAAGCCGCTGGGCCTCTATGATCCGGCTCTAGATAAGGACTCTTGCGGGGTTGGATTCGTCTCGGAATTATCGGGCGAGAGCAGTCGCAAAACGGTGACTGATGCTCTGGAGATGTTGGTGCGCATGTCACATAGAGGTGCCTGTGGGTGTGAAACCAACACTGGAGATGGAGCCGGCATTCTTGTGGCTCTTCCTCACGAATTTTACAGGAAGGTTGCTAAGGATGTGGGATTCGAGCTTCCACCGGCTGGACAATACGCTGTTGGCATGTTTTTCTTGCCTACGTCAGAAAGTCGTAGGGAAGAAAGCAAAAGAATATTTAAAGAGATTGCAGAATCTCTTGGACACTCTGTTCTTGGTTGGCGTTCCGTGCCCACTGATAACTCAGGATTGGGCAAATCTGCCATACAGACAGAACCCGTCATTGAGCAAGTGTTCCTTACACATAGTCCTCGATCAAGACTTGATCTGGAAAGACAGATGTACATATTAAGAAAGGTCTCTATGGCAGCTATTGAATCTGCATTAAAACTCCAACTCGATGGCATTACAGATTTCTATATCTGTTCACTTTCATCAAGGACCGTTGTTTACAAGGGTCAGTTGACTCCTGCGCAATTGAAGGATTACTATTTTGCTGACCTTGGCGATGAAAGGTTTACGAGCTACATGGCCCTGATACACTCACGATTTTCTACCAACACATTCCCAAGCTGGGATCGTGCTCAGCCTATGCGTGTTTTGGGCCACAATGGAGAAATCAACACACTTAGAGGCAATGTAAACTGGATGAGGGCACGTGAGGGTCTACTCAAGTGCAAGGAACTTGGTTTGCCAGAGAGTGAGTTGAAGAAACTCTTGCCCATTGTGGATGCAAATTCATCAGATTCAGGAGCATTTGATGGTGTTCTTGAATTTTTGGTTCAATCTGGAAGAAGTCTTCCTGAAGCTGTCATGATGATGATTCCTGAAGCTTGGCAAAATGACAAAAATATGGATCCTGAGCGTAAAGCTTTTTATGAATACTTCTCAGCTCTCATGGAGCCATGGGATGGGCCTGCTCTTATCTCATGTAAATTCACTAGAACTCCTAAGAATCATATTTGCTCTATTTCTTGCATAACATTTACCGATGGCCACTATCTTGGAGCTACTTTGGATAGGAATGGTTTGCGACCTGGCCGTTTCTATGTCACCCACAGTGGAAGAGTCATAATGGCAAGTGAAGTTGGTGTTGTAGACATTCCTCCTGAAGATGTGTGTAGGAAAGGACGACTTAACCCTGGCATGATGCTTCTGGTTGATTTTGAAAAGCATGTTGTTGTAAATGATGATTCCTTGAAGGAACAATATTCATTGGCAAGGCCGTATGGAGAGTGGCTCAAGAGGCAGAAGATTGAACTCAAAGACATAGTTGACTCCGTACATGAATCCCAAAGAGCAGCACCAGCCATAGCAGGAGTGGTGCTAGCATCTAATGATGATGTGAACATGGAAAATATGGGAATTCATGGTTTATTGGCTCCATTGAAAGCATTTGGTTATACCATTGAATCCTTAGAAATGTTATTGCTTCCCATGGCAAAAGATGGTGTTGAAGCTCTTGGATCAATGGGAAATGATACTCCATTAGCTATCATGTCTAATAGAGAGAAGCTGACCTTTGAATACTTCAAGCAATTGTTTGCCCAAGTGACAAACCCCCCAATTGATCCTATCCGTGAGAAAGTAGTCACTTCCACGGAATGTATGATTGGTCCAGAAGGTGATCTGACAGAAACTTCAGAGGAACAATGCCACCGTCTTTCACTAAAGGGCCCCCTTTTATCCATTGAACAAATGGAAGCCGTTAAAAAGATGAATTATCGGGGTTGGCGAAGCAAAGTGATAGACATAACTTACTCTAAAGACCGTGGTAGTAGAGGATTGCAGGAAGCCTTGGACAGAATTTGTGAAGAAGCACACGATGCAATTACTAAGGGATATACAACACTTGTGCTATCCGATAGAGCTTTCTCAAGGAAACGCGTTGCTGTGAGCTCTCTTCTGGCTGTTGGTGCTGTCCATCAACACCTAGTCAAAACCCTTGAACGCACTAGAGTTGCTTTACTAGTTGAATCTGCCGAGCCACGTGAAGTGCATCATTTCTGTACCCTTGTTGGCTTTGGTGCTGATGCTATTTGCCCATACTTGGCCTTGGAGGCAATCTGGCGACTACAACTTGATGGAAAGATCCCACCAAAGGCAAGTGGTGAATTCCACTCAAAGGATGAGCTAGTCAAGAAGTACTTCAAAGCAAGCAACTATGGAATGATGAAGGTTCTTGCCAAGATGGGAATATCTACTTTGGCCTCTTACAAAGGCGCTCAGATCTTTGAAGCTCTAGGTCTTTCATTAGAAGTAATTGAAAAATGTTTTGCTGGCACTCCTAGTCGAGTTGAGGGTGCTACATTTGAGATGCTTGCTCGAGATGCCCTTCAACTGCATGAGTTGGCATTCCCTTCTCGTGTTTTCTCTCCAGGAAGTGCAGAAGCTCTTGCGCTGCCAAATCCTGGGGATTATCATTGGAGAAAAGGTGGTGAACTTCACCTGAATGATCCACTTGCTATAGCGAAACTTCAAGAGGCTGCCAGAACTAACAGCAAAGATGCATATAAACAGTATTCTAAGCTCATTCATGAACTAAATAAGGCTTGTAATTTGCGTGGTTTGCTTAAATTCAAAGAGTCAGCAGCGAAGATTCCCCTTGATGAGGTGGAACCAGCTGGCGAGATAGTTAAACGATTTTGCACTGGTGCCATGAGTTATGGGTCAATATCATTGGAGGCACACACAACACTCGCAATGGCTATGAATAAGATTGGGGGAAAATCCAACACAGGTGAGGGAGGTGAGCAACCATCTCGCATGGAGCCTCTTCCTGATGGCTCAATGAATCCAAAACGGAGTGCCATTAAGCAAGTTGCAAGTGGAAGATTCGGAGTTACAAGTTACTACCTTGCGAATGCTGATGAACTGCAAATAAAGATGGCCCAGGGAGCAAAGCCAGGTGAGGGAGGTGAACTTCCTGGCCACAAAGTTGTAGGAGAGATTGCTGTCACCAGGAACTCAACTGCTGGGGTAGGACTTATCAGTCCTCCTCCTCATCATGATATTTACTCCATTGAAGACCTTGCACAGTTAATTCATGATCTTAAGAATGCCAACCCAGCTGCCAGAATTAGTGTGAAGTTAGTATCTGAAGTTGGAGTGGGCATTGTCGCTAGTGGAGTTGTTAAAGGGCATGCCGATCATGTCTTGATCTCAGGTCATGATGGGGGTACAGGAGCATCTAGATGGACTGGCATAAAAAATGCTGGTCTCCCTTGGGAGCTTGGCTTGGCTGAGACCCACCAAACTTTGGTCGCAAATGACTTACGTGGTCGCACAGTTCTCCAGACTGATGGGCAGCTAAAAACTGGCAGAGATGTTGCCATCGCTGCATTGCTTGGTGCTGAAGAGTTTGGTTTCAGCACAGCCCCACTCATTACTCTTGGTTGCATCATGATGAGGAAGTGCCACAAGAACACTTGTCCTGTTGGCATTGCCACTCAAGATCCAGTTCTTCGAGATAAGTTTGCAGGAGAACCTGAACATGTTATCAACTTTTTCTTCATGGTGGCAGAAGAGATGAGAGAAATCATGTCTCAGCTGGGATTTCGTACCGTAAATGAGATGGTTGGCCGTTCAGATATGCTTGAAGTTGATAAAGAGGTAACTAAAAGCAATGAAAAGATGGAGAATATTGATCTCTCACTGTTGCTGAGACCCGCAGCTGAATTACGTCCAGAAGCCGCCCAATATTGTGTGCAAAAACAAGATCACAGTTTGGACATGGCCTTGGACAATAAGCTTATAAGTCTGTCTAGTGCTGCTTTGGAAAAGGGTCTTCCAGTGTACATTGAAACCCCAATCTGCAATGTAAATCGTGCAGTAGGAACCATGCTTAGCCATGAGGTGACTAAACGATACCACTTGGCTGGTCTTCCAACTGATACCATTCATATTAAATTTGCTGGAAGTGCAGGACAGAGTTTTGGTGCATTCCTTTGTCCTGGCATCACTTTGGAACTTGAAGGGGATAGCAATGACTATATTGGCAAAGGATTATCTGGTGGCAAGATTGTGGTATACCCTCCCAAGGGAAGCAACTTTGATCCTAAGGAAAATATTGTAGTTGGCAATGTGGCATTGTATGGTGCAACAACTGGTGAGGCTTATTTCAATGGAATGGCAGCAGAAAGATTCTGTGTACGTAATTCTGGGGTTAAGGCTGTTGTGGAAGGTGTTGGTGATCATGGATGTGAATACATGACTGGTGGAACTGTTGTTGTGCTTGGGAAAACTGGTAGAAATTTTGCAGCAGGTATGAGCGGCGGTATTGCTTATGTGCTTGATGCTGATGAAAAATTCCGCTGTCGATGCAACCTTGAGCTTGTTGATCTAGACAAGGTCGAAGAAGAGGAGGATATTATGACTCTTAGAATGATGATACAGCAACATCAACGCCACACAAATAGTAAACTTGCCAAAGAAATGCTTGACAATTTTGAGAATCTTGTTCCTAAATTTATCAAGGTGTTCCCCAGGGAGTATAAACGTGTACTTGCAAATATGAAGGCTGAGGCAGCCTCCAAAGAAATGGTAGAGGCTGTTAAAGATGCAGAAGATGAAGATGAAGCGCAACCGGTGGAAAAAGATGCCTTTGAAGAACTTAAGAAACTGGCTGCTGCATCTTTGAATGAAAAACCAAGCCAGGATGAACAGGCTAAAGCACCCAAGAGGCCTCATCAAGTTGCTAATGCTGTCAAACACAGAGGTTTTGTTGCCTATGAGCGTGAGGGTGTTCAGTACCGTGACCCTAATATTCGAGTGAATGATTGGGAAGAAGTCATGGAGGAGGGGAAGCCTGGCCCACTTTTGAAGACGCAAGCAGCCCGTTGCATGGACTGTGGTACTCCTTTCTGTCATCAGGAAAATTCCGGATGTCCCCTTGGGAATAAAATACCTGAATTTAATGAGTTAGTATACCAAAATAGGTGGCGTGAAGCATTAGATCGCCTTCTTGAGACAAACAACTTTCCAGAGTTTACTGGTCGGGTGTGCCCAGCACCCTGTGAAGGTTCTTGTGTCTTGGGCATCATTGAGAATCCTGTATCTATAAAAAGTATCGAATGTGCTATAATAGACAAAGCTTTTGAGGAGGGTTGGATGGTGCCACGACCTCCACCCAAGAGGACTGGGAAAAGAGTTGCCGTTGTTGGAAGTGGACCGGCAGGCTTGGCCACAGCTGATCAACTAAATAAAATGGGTCATACAGTAACTTTATATGAGAGAGCTGATAGGATTGGAGGGCTTATGATGTATGGGGTGCCCAACATGAAAACTGACAAAGTGGATATAGTCCAGCGCCGGGTCAACCTTATGGCTGACGAGGGAGTCGAGTTTATGGTGAATGCCAATGTTGGAGTTGATCCTTTGTTCTCTCTGGATCGGCTTCGAGAAGAAAATGATGCTATTGTCTTAACTGTAGGAGCTACAAAGCCAAGGGATCTTACCGTACCAGGACGAGATCTGTCAGGAGTTCATTTTGCCATGGAATTTCTTCATGCAAACACCAAAAGCTTGCTAGATAGTAATCTTGAGGATGGCAATTATATTTCTGCCAAGGGTAAGAAGGTTGTCGTCATTGGTGGGGGTGACACTGGCACAGATTGCATTGGGACATCCATTCGTCATGGATGTAGTAGCGTTGTGAATTTGGAACTGCTTCCACAGCCACCACAAACTAGGGCCCCAGGCAACCCTTGGCCACAGTGGCCTCGCATATTCCGTGTAGACTATGGGCACCAGGAAGCTGCAACTAAATTTGGGAAAGATCCAAGATCTTATGAGGTTCTAACCAAGCGTTTTGTTGGGGATGAGAATGGAAACTTGAAAGGACTTGAAGTGATCCGGGTGCGCTGGGAGAAGGATGAAACTGGCAAGTTTCAGTTTAAGGAAATTGAGGGTTCTGAGGAGATTATTGTGGCTGACTTAGTTTTGTTAGCCATGGGCTTCCTTGGCCCCGAGTCTACAATTGCTGACAAGTTGGGGCTGGAGAAAGACAACAGGTCAAACTTCAAGGCAGATTATGGCCGCTTCTCAACCAGCGTGAAAGGGGTCTTTGCAGCTGGGGATTGTCGCCGGGGCCAGTCCCTTGTGGTGTGGGCAATTTCAGAGGGACGACAAGCTGCTACTCAAGTTGATAAGTATCTCGTTGAAGAAGCGAGAGAACATAACGAGGAGGAACTTCTTACGAGGCAGGAAGACCTTACCAAGAAGCAGCAGGACAGCGGTAAACACACCGTAATGACATGA 6693 0.4544 MSSSLSFIQLPTRSSCALPSINNPQLNARPSNKLGGRATLYSATRKSSCLVQKNIFGSRLRPCRAPGSVKLHVWKSDGPGSSPKLRVVVRSALSAVPDKPLGLYDPALDKDSCGVGFVSELSGESSRKTVTDALEMLVRMSHRGACGCETNTGDGAGILVALPHEFYRKVAKDVGFELPPAGQYAVGMFFLPTSESRREESKRIFKEIAESLGHSVLGWRSVPTDNSGLGKSAIQTEPVIEQVFLTHSPRSRLDLERQMYILRKVSMAAIESALKLQLDGITDFYICSLSSRTVVYKGQLTPAQLKDYYFADLGDERFTSYMALIHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMRAREGLLKCKELGLPESELKKLLPIVDANSSDSGAFDGVLEFLVQSGRSLPEAVMMMIPEAWQNDKNMDPERKAFYEYFSALMEPWDGPALISCKFTRTPKNHICSISCITFTDGHYLGATLDRNGLRPGRFYVTHSGRVIMASEVGVVDIPPEDVCRKGRLNPGMMLLVDFEKHVVVNDDSLKEQYSLARPYGEWLKRQKIELKDIVDSVHESQRAAPAIAGVVLASNDDVNMENMGIHGLLAPLKAFGYTIESLEMLLLPMAKDGVEALGSMGNDTPLAIMSNREKLTFEYFKQLFAQVTNPPIDPIREKVVTSTECMIGPEGDLTETSEEQCHRLSLKGPLLSIEQMEAVKKMNYRGWRSKVIDITYSKDRGSRGLQEALDRICEEAHDAITKGYTTLVLSDRAFSRKRVAVSSLLAVGAVHQHLVKTLERTRVALLVESAEPREVHHFCTLVGFGADAICPYLALEAIWRLQLDGKIPPKASGEFHSKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSLEVIEKCFAGTPSRVEGATFEMLARDALQLHELAFPSRVFSPGSAEALALPNPGDYHWRKGGELHLNDPLAIAKLQEAARTNSKDAYKQYSKLIHELNKACNLRGLLKFKESAAKIPLDEVEPAGEIVKRFCTGAMSYGSISLEAHTTLAMAMNKIGGKSNTGEGGEQPSRMEPLPDGSMNPKRSAIKQVASGRFGVTSYYLANADELQIKMAQGAKPGEGGELPGHKVVGEIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPAARISVKLVSEVGVGIVASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLRDKFAGEPEHVINFFFMVAEEMREIMSQLGFRTVNEMVGRSDMLEVDKEVTKSNEKMENIDLSLLLRPAAELRPEAAQYCVQKQDHSLDMALDNKLISLSSAALEKGLPVYIETPICNVNRAVGTMLSHEVTKRYHLAGLPTDTIHIKFAGSAGQSFGAFLCPGITLELEGDSNDYIGKGLSGGKIVVYPPKGSNFDPKENIVVGNVALYGATTGEAYFNGMAAERFCVRNSGVKAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDADEKFRCRCNLELVDLDKVEEEEDIMTLRMMIQQHQRHTNSKLAKEMLDNFENLVPKFIKVFPREYKRVLANMKAEAASKEMVEAVKDAEDEDEAQPVEKDAFEELKKLAAASLNEKPSQDEQAKAPKRPHQVANAVKHRGFVAYEREGVQYRDPNIRVNDWEEVMEEGKPGPLLKTQAARCMDCGTPFCHQENSGCPLGNKIPEFNELVYQNRWREALDRLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKAFEEGWMVPRPPPKRTGKRVAVVGSGPAGLATADQLNKMGHTVTLYERADRIGGLMMYGVPNMKTDKVDIVQRRVNLMADEGVEFMVNANVGVDPLFSLDRLREENDAIVLTVGATKPRDLTVPGRDLSGVHFAMEFLHANTKSLLDSNLEDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCSSVVNLELLPQPPQTRAPGNPWPQWPRIFRVDYGHQEAATKFGKDPRSYEVLTKRFVGDENGNLKGLEVIRVRWEKDETGKFQFKEIEGSEEIIVADLVLLAMGFLGPESTIADKLGLEKDNRSNFKADYGRFSTSVKGVFAAGDCRRGQSLVVWAISEGRQAATQVDKYLVEEAREHNEEELLTRQEDLTKKQQDSGKHTVMT 2230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0207 2230 Gene3D - 1968 2130 IPR036188 -
Lele01g0207 2230 SUPERFAMILY FMN-linked oxidoreductases 603 1368 - -
Lele01g0207 2230 PIRSF GOGAT 67 2222 IPR012220 GO:0005506|GO:0006537|GO:0010181|GO:0016040|GO:0050660
Lele01g0207 2230 CDD GltS 113 553 - -
Lele01g0207 2230 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1384 1648 IPR036485 GO:0016491
Lele01g0207 2230 CDD GltS_FMN 965 1344 IPR002932 GO:0006537|GO:0015930|GO:0016638
Lele01g0207 2230 Pfam Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1738 1847 IPR028261 -
Lele01g0207 2230 MobiDBLite consensus disorder prediction 2207 2222 - -
Lele01g0207 2230 PRINTS Adrenodoxin reductase family signature 1927 1937 - -
Lele01g0207 2230 PRINTS Adrenodoxin reductase family signature 1884 1897 - -
Lele01g0207 2230 PRINTS Adrenodoxin reductase family signature 1861 1883 - -
Lele01g0207 2230 PRINTS Adrenodoxin reductase family signature 2005 2019 - -
Lele01g0207 2230 Pfam GXGXG motif 1415 1601 IPR002489 GO:0016491
Lele01g0207 2230 FunFam Glutamate synthase [NADH], amyloplastic 1860 1968 - -
Lele01g0207 2230 FunFam Glutamate synthase 1 [NADH] 587 946 - -
Lele01g0207 2230 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 113 561 IPR029055 -
Lele01g0207 2230 MobiDBLite consensus disorder prediction 1054 1076 - -
Lele01g0207 2230 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 113 570 IPR029055 -
Lele01g0207 2230 Gene3D Aldolase class I 584 947 IPR013785 -
Lele01g0207 2230 MobiDBLite consensus disorder prediction 2207 2230 - -
Lele01g0207 2230 Gene3D Aldolase class I 948 1387 IPR013785 -
Lele01g0207 2230 Pfam Glutamine amidotransferases class-II 113 558 IPR017932 -
Lele01g0207 2230 FunFam Glutamate synthase 1 [NADH] chloroplastic 113 570 - -
Lele01g0207 2230 Gene3D - 1388 1660 IPR036485 GO:0016491
Lele01g0207 2230 SUPERFAMILY FAD/NAD(P)-binding domain 1857 2197 IPR036188 -
Lele01g0207 2230 TIGRFAM GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 1715 2201 IPR006005 GO:0006537|GO:0016639
Lele01g0207 2230 Pfam Glutamate synthase central domain 608 896 IPR006982 GO:0006807|GO:0015930
Lele01g0207 2230 Gene3D - 1860 1967 - -
Lele01g0207 2230 PANTHER GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN 175 2217 - -
Lele01g0207 2230 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 113 535 IPR017932 -
Lele01g0207 2230 Coils Coil 1649 1669 - -
Lele01g0207 2230 FunFam Glutamate synthase, large subunit 1388 1659 - -
Lele01g0207 2230 SUPERFAMILY alpha-helical ferredoxin 1713 1870 - -
Lele01g0207 2230 FunFam Glutamate synthase 1 [NADH] chloroplastic 1696 1859 - -
Lele01g0207 2230 FunFam Glutamate synthase [NADH], amyloplastic 1969 2130 - -
Lele01g0207 2230 CDD gltB_C 1392 1641 IPR002489 GO:0016491
Lele01g0207 2230 Gene3D - 1696 1859 IPR009051 GO:0051536
Lele01g0207 2230 MobiDBLite consensus disorder prediction 1690 1709 - -
Lele01g0207 2230 FunFam Glutamate synthase [NADH], amyloplastic 948 1371 - -
Lele01g0207 2230 Pfam Conserved region in glutamate synthase 963 1332 IPR002932 GO:0006537|GO:0015930|GO:0016638
Lele01g0207 2230 Pfam Pyridine nucleotide-disulphide oxidoreductase 1860 2186 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0207 Lele-ChrLele01 1170961 1182115 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0207 01 1170961 1182115 Lele03g0212 03 1140595 1151693 hybridization
Lele01g0207 01 1170961 1182115 Lele04g0207 04 1182238 1197070 hybridization