Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0203 ATGTTCTCTCATAGCGCGACTGGAAACAGCTGGAGTTGGCTTTGTGTTCTGGATCTGGAAAAGCGTGAGAAAAGGAAAGATAGTGATATTGCTCAGTCCTCTGCCATGTCGGAGTATTTTGATTTAGCAGCAGAAGGAGACCTGTTCAAAGCCCCTGAACCTATATTTGAAGAACCAGTCATGGACTTGGATCCCATGACGGCAGCCATTTCAATGATATCTTGTGGGGAAGACGTTGTCTCCTCACAGGGACTAAAACCCTCAGACTCCCTTCAACATGAACAACTCCTGAGCGAGGTTTTCTATGAATGCAAAAAAGACATGCTGGAAAAGGAAGCGATTGAGTCACCACTATCTGATATTCTGGAAATCAGGGTTCCTACTCTGAATACAGATGAAAACCAAACTCAAGAAAGTAAACCATTTCCTGGCTTGCCATTACCAAAAAGTGTGAGCTCAGGATGTTTGAGCTCAATGGAGTGGATGCAAGGAACTTCAATGAAGCCTGCTTTTATTGATTTCCCAGGAATTATCTGTGCAGATTATGGCATGCGGAGGGCATTTAGTGAAGGAGATATAAAGGCTCTTGGTAGTGGTAATATGCACGCTATCCAATCTCCCTTAGAGAGTTCCCTTCCTATCAGTAACTGTACCAGCGAGGAACGCCGAGAAAAGCTCTCCAGATACAGGAGTAAGAAGACGAGGAGAAATTTCGGCCGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAACCAAGAATCCGTGGAAGATTTGCCAAGACCGAAGAATTTGACGCCAGGAGGCAATGCTAG 822 0.4513 MFSHSATGNSWSWLCVLDLEKREKRKDSDIAQSSAMSEYFDLAAEGDLFKAPEPIFEEPVMDLDPMTAAISMISCGEDVVSSQGLKPSDSLQHEQLLSEVFYECKKDMLEKEAIESPLSDILEIRVPTLNTDENQTQESKPFPGLPLPKSVSSGCLSSMEWMQGTSMKPAFIDFPGIICADYGMRRAFSEGDIKALGSGNMHAIQSPLESSLPISNCTSEERREKLSRYRSKKTRRNFGRKIKYACRKALADSQPRIRGRFAKTEEFDARRQC 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0203 273 Pfam CCT motif 222 264 IPR010402 GO:0005515
Lele01g0203 273 ProSiteProfiles CCT domain profile. 222 264 IPR010402 GO:0005515
Lele01g0203 273 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 151 265 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0203 Lele-ChrLele01 1139818 1142035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0203 218 263 C2C2-CO-like Transcription Factor Family AT5G24930 54.348 3.40e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele01g0203 CCT 5.1e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0203 01 1139818 1142035 Lele03g0209 03 1115086 1117630 hybridization
Lele01g0203 01 1139818 1142035 Lele04g0205 04 1154752 1161392 hybridization