Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0195 ATGGGTAAGAAAGGAGGCGGATGGTTCTCGTCAGTTAAGAAAGTTTTCAGATCGTCTTCTAATAAGGATTCGTCGGCGCCGGCGAGGAAGAAGGATAATGAAAGAAGACAGCCTGAAGTGGCAGAGGTCGTGTCTTTCGAGCATTTTCCTGCGGAGAGTTCTCATGACGATGTCACCAATGAGAACAGTATAGCATCCACGCCTGTGGCGGAAGATAGAAATCATGCCATCGCGGTGGCTGCGGCCACAGCGGCGGCTGCAGAAGCAGCGGTCGCAGCGGCACAAGCAGCGGCCAGAGTTGTTCGATTGGCAGGTTACGGGCGCCACTCAAAGGAAGAAAGAGCAGCAACTCTCATTCAATCATACTACAGAGGCTACCTAGCTCGGCGGGCACTGCGTGCGTTGAAGGGATTGGTGAGGCTGCAGGCACTTGTGAGGGGGCATAATGTGCGGAAGCAAGCACAGATGACAATGCGGTGCATGCAAGCATTAGTTCGAGTGCAGGCAAGAGTAAGAGCTCGCAGATACCATTTGAGACAGGAGCAACTTCACAAGACCGAGGAGGAGAGAGAATTTGAGGAACAGCAAGTGGCAAGGCCTATGAGCCCCATGAATGGGTGGCACAATAAGCGTCACGGCGGCCACAAAGCGCCACAAAATGATTCCAGCAGGAAACACGACGCCGTAATGAAAAGGGAGAGAGCTCTCGCTTACGCTGACAACTCTCAGCAACAGCAGAGGCCGTTTCAACCGTCAGACCCCAATGACGATGATGTTGGAACCATGGAGTACAACAACGAGCGTGAAAAGGCCCCTTGGGGTTGGAACTGGTTGGATCGTTGGATGCCATCGCAACCATACAATGTAAGGAACGTGGGGCCACTTGAGACCTCTTACATGACGCTTGCCACCACAACCACCACCACCACCGACGACATGTCTGAAAAGACGGTGGAGATGGACATGGTCGCTCCTTTAGGCTCAAGCAACGTCAGCGCTATGGGCCTAATGAACCAGGAGTTTCTGGATTTAAGCCCAATGTCCAACAGAAAGCACCATCGACAATTCAGTTTAAATGTGCCTAGCTATATGGCTCCGACCCAGTCTGCCAAGGCCAAGGTGCAAGGTCAGGTGCCGGTCAAGCCACGTGGCTCACCTGGGCCCCAGTGGAACTCGTCCACAAAGAAAGGGCCCGGCGGTATTGGGTCGGTCTGTGATTCCTCAAGCTCCGGGGGAGGAAGGTCGAATTACCACTTCCCGAGGAGCCCCAGCCCAAAAATTAATGGGAGTCGGACGCAGTCTAGGCAGATTGCGGGTAGCAGCCCGGATTATTCGGGCTTTGAGGATTGGGTACTTCCCCTCGGAGGCCATGGTTGGGCATGA 1383 0.5401 MGKKGGGWFSSVKKVFRSSSNKDSSAPARKKDNERRQPEVAEVVSFEHFPAESSHDDVTNENSIASTPVAEDRNHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYGRHSKEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRYHLRQEQLHKTEEEREFEEQQVARPMSPMNGWHNKRHGGHKAPQNDSSRKHDAVMKRERALAYADNSQQQQRPFQPSDPNDDDVGTMEYNNEREKAPWGWNWLDRWMPSQPYNVRNVGPLETSYMTLATTTTTTTDDMSEKTVEMDMVAPLGSSNVSAMGLMNQEFLDLSPMSNRKHHRQFSLNVPSYMAPTQSAKAKVQGQVPVKPRGSPGPQWNSSTKKGPGGIGSVCDSSSSGGGRSNYHFPRSPSPKINGSRTQSRQIAGSSPDYSGFEDWVLPLGGHGWA 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0195 460 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Lele01g0195 460 Pfam Protein of unknown function (DUF4005) 345 383 IPR025064 -
Lele01g0195 460 MobiDBLite consensus disorder prediction 214 234 - -
Lele01g0195 460 MobiDBLite consensus disorder prediction 386 441 - -
Lele01g0195 460 MobiDBLite consensus disorder prediction 24 42 - -
Lele01g0195 460 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Lele01g0195 460 Gene3D - 109 161 - -
Lele01g0195 460 MobiDBLite consensus disorder prediction 367 449 - -
Lele01g0195 460 MobiDBLite consensus disorder prediction 15 42 - -
Lele01g0195 460 PANTHER IQ-DOMAIN 5-RELATED 1 398 - -
Lele01g0195 460 SMART iq_5 111 133 IPR000048 GO:0005515
Lele01g0195 460 SMART iq_5 134 155 IPR000048 GO:0005515
Lele01g0195 460 MobiDBLite consensus disorder prediction 185 262 - -
Lele01g0195 460 Pfam IQ calmodulin-binding motif 139 154 IPR000048 GO:0005515
Lele01g0195 460 Pfam IQ calmodulin-binding motif 113 133 IPR000048 GO:0005515
Lele01g0195 460 MobiDBLite consensus disorder prediction 238 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0195 Lele-ChrLele01 1083442 1085875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0195 1 426 IQD Protein Family AT3G49260 49.234 9.08e-98 300
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0195 01 1083442 1085875 Lele01g0195 01 1083442 1085875 ECH
Lele01g0195 01 1083442 1085875 Lele03g0200 03 1058571 1061149 hybridization
Lele01g0195 01 1083442 1085875 Lele04g0192 04 1062639 1066898 hybridization