Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0181 ATGGACACAGCTCAGTGGGCACAGGGGATTGGAGTGATTAAACAGCCAGTGGTGGAAGGTTCAATTCCAAAGCCTCCTATGACCGAAAGGAAGGTGAGGCCTCAGAAAGATCAAGCTCTGAACTGCCCAAGGTGCAATTCAACCAACACTAAATTCTGCTACTACAATAACTACAGCCTCTCTCAGCCAAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACCGAAGGTGGGTCACTGAGAAATGTTCCCGTGGGTGGAGGCTCCCGAAAGAACAAGAGATCTTCATCTTCATCCTCATCAGCAGCAATATCCTCAAAAAAGCTTCCTGATCTGAACCCCAAGATCCAGCAAGGCCAAGATCTTAACTTAGCATGTCCACCACCACCAGCACCTGAGGACTATAACAATAGCGTATCGAAATTCATCGAGGCTCCTTTTAGTACTGAAGACAAGACTACACTTTCTCATCATCATGATCAGTTATCCTCCATGGAGCTTCTGAACACTACTGGAATTCCGTCGTCAAGGACTTTATGTTCGTTGATGCCTATGTCGGCGTCGGATTCTTCCGGTTCGGCAATGTATAATTCAAGTGGGTTTCCTAATTTGCAAGATTTTAAGCCTCCTCCAGGGCTTAGTTTCAGTCTTGAAGGGTTTGCAAATGGGTACGGAGGTATTTCTGGAATGCACGAGGGAAGTAGTGGCGATGGTGGTGCGAGGTTGTTGTTTCCTACTGAGGATTTGAAGCAAGTTCCAAGTAGTACTGATCATTATGAGCAGAATAGAAGCCATGCGGATTCAACGGGCTTTTGGAATGGCATGTTAGGTGGAGGATCGTGGTGA 846 0.4645 MDTAQWAQGIGVIKQPVVEGSIPKPPMTERKVRPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSSSSAAISSKKLPDLNPKIQQGQDLNLACPPPPAPEDYNNSVSKFIEAPFSTEDKTTLSHHHDQLSSMELLNTTGIPSSRTLCSLMPMSASDSSGSAMYNSSGFPNLQDFKPPPGLSFSLEGFANGYGGISGMHEGSSGDGGARLLFPTEDLKQVPSSTDHYEQNRSHADSTGFWNGMLGGGSW 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0181 281 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 29 186 IPR045174 GO:0003700|GO:0006355
Lele01g0181 281 MobiDBLite consensus disorder prediction 81 130 - -
Lele01g0181 281 Pfam Dof domain, zinc finger 37 94 IPR003851 GO:0003677|GO:0006355
Lele01g0181 281 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Lele01g0181 281 MobiDBLite consensus disorder prediction 89 120 - -
Lele01g0181 281 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0181 Lele-ChrLele01 1002744 1004092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0181 27 281 C2C2-Dof Transcription Factor Family AT3G61850 45.620 4.48e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele01g0181 zf-Dof 1.1e-33 No_clan