Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0172 ATGATTTCGGCTACCTCCATCTCTTCCATTTTCTTCGCCCTTCTCCTCTCCTTTCTAATCCTTCGTTTCTTCCGCAAAACTTCCCTAGTATATATTCTTCATAGATGGTGGTTTACCCTTGAAAACCAACTCCATATTCACCAGTCCTTCAAAATCCCACCCTACAATGAGCATTACCAGGAAAATCAACTTTACCAGAAAACTCTCACGTACCTTAACTCACTGCCTTCCGTAGAAGACTCTGATTTCACCAAACTCTTCTCTGGTTCCAAGCCTGGTGAAATTTTCCTTCATCTAGATGCTAACCAGACAGTGGGCGACACTTTTCTCGGGGCTAGAGTTTCCTGGACAAAGGAAAAACCCGAAGGAAACGTTAATTCTGCACTGGTACTCAAAATCAGGAAGAAAGACAAACGCAGAATTTTCCGTCAGTACTTCCAGCACATCCTCACGGTGGCGGATGAAATCGAACAGAAGACAAAAGAGATTAAGTTATGCGTGAACTCTGGAAGTGACGAGAACTCGCGGTGGCGATCGGTTCCATTCACCCACCCGGCGAGCTTCGACACGGTGGTGATGGATGCCGAGCTGAAGAACAAGGTGAAATCCGATCTCGAACTGTTTCTGAAGTCCAAGCAGTACTATAACCGGTTGGGCCGTGTTTGGAAACGAGGCTACCTTCTCTACGGGGCGTCCGGAACGGGAAAATCTAGTTTCATCGCAGCAATGGCAAGGTTCTTGTGTTACGACGTCTATGATATTGATATCTCCAAAGTTTCGGACGACTCCGATTTGAAGATGCTATTGCTGCAAACAACGAGTAAATCGGTGATTGTCGTCGAAGAGCTCGATAAATTCCTTGCAGGGAAATCAAAGGCCGTGAGTCTATCAGGTATGTTAAACTTCATGGACGGAATTATAACGTGCTGTGGGGAGGAGAGGGTGATGGTGTTTACGGTGAACGAGAAAGATGAAATCGATCCGGCGGTGCTGAGGCCAGGAAGGATTGACGTTCACATACACTTCCCCTTATGCGATTTCTCCACCTTCAAGGTTCTAGCCAGTAGTTATTTGGGGGTGAAGGATCACAAGCTTTTTCCTCAGGTGGAGGAGGTTTTTCAAGGGGGGGCCAGGATGAGCCCGGCCGAGATCGGTGAGATCATGATCTCGAACCGGAATTCACCCAGCCGGGCCTTGAAAACCGTCATCACGGCCCTCCATATCAACGGCGGTCATGGGAGGAGGGGCCAGAGGTCGGGCGATGGCGGGTCATGTCGGAATAGCGGGGAATTGGGTCAACCTGACGGGGTTGCGTGTCAGGAGAGTGTCACGATGAGGGAGTTCCGAAAGCTCTATGGGCTTTTGCGTATAGGGAGTAGGAGAAAAGACGATCATTTTGGGCCCATGGAGAGAGAAGGCCAACGGATCCAAGCATGA 1437 0.4899 MISATSISSIFFALLLSFLILRFFRKTSLVYILHRWWFTLENQLHIHQSFKIPPYNEHYQENQLYQKTLTYLNSLPSVEDSDFTKLFSGSKPGEIFLHLDANQTVGDTFLGARVSWTKEKPEGNVNSALVLKIRKKDKRRIFRQYFQHILTVADEIEQKTKEIKLCVNSGSDENSRWRSVPFTHPASFDTVVMDAELKNKVKSDLELFLKSKQYYNRLGRVWKRGYLLYGASGTGKSSFIAAMARFLCYDVYDIDISKVSDDSDLKMLLLQTTSKSVIVVEELDKFLAGKSKAVSLSGMLNFMDGIITCCGEERVMVFTVNEKDEIDPAVLRPGRIDVHIHFPLCDFSTFKVLASSYLGVKDHKLFPQVEEVFQGGARMSPAEIGEIMISNRNSPSRALKTVITALHINGGHGRRGQRSGDGGSCRNSGELGQPDGVACQESVTMREFRKLYGLLRIGSRRKDDHFGPMEREGQRIQA 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0172 478 MobiDBLite consensus disorder prediction 410 436 - -
Lele01g0172 478 Gene3D - 177 341 IPR027417 -
Lele01g0172 478 CDD AAA 223 344 - -
Lele01g0172 478 Gene3D - 342 404 - -
Lele01g0172 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 406 IPR027417 -
Lele01g0172 478 Pfam Domain associated at C-terminal with AAA 32 117 IPR025753 -
Lele01g0172 478 Pfam ATPase family associated with various cellular activities (AAA) 227 344 IPR003959 GO:0005524|GO:0016887
Lele01g0172 478 PANTHER BCS1 AAA-TYPE ATPASE 36 407 - -
Lele01g0172 478 SMART AAA_5 222 346 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0172 Lele-ChrLele01 967722 969158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0172 218 342 Calmodulin-binding Proteins AT3G56690 26.619 1.10e-07 52.8