Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0171 ATGGCGGGTTCGTCCGAGACGAAGTTCGTCCAAGATTTGTTATTGTACGCGGCGAGTGCGGGGCTCAGTTGCTTGGTTTTGTTCGCTGGGCTTCGACACCTCGACCCTAATCGTGAGACATCAAAGAAAGCCCTTCAACACAAGAAAGATTTAGCTAAGCGTCTTGGTCGTCCTCTCATTCAAACAAACGCTTACGAGGATGTCATAGCATGTGATGTTATTAATCCCGACCACATTGATGTGAAGTTTGACTCTATTGGGGGACTGCAAACGATTAAGCAAGCTTTGTTTGAGCTTGTTATACTGCCGCTTAAACGACCTGAACTATTCTGTCATGGCAAACTTCTTGGCCCACAAAAGGGGGTCCTCTTGTATGGACCCCCTGGTACAGGGAAAACCATGCTTGCCAAAGCTATTGCAAAGGAGTCTGGATCAGTTTTCATTAATGTAAGGATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAGAAACTTGTGGCTGCTGTATTTAGCCTGGCTTATAAGCTCCAGCCTGCTATCATTTTCGTTGATGAAGTTGACAGCTTTTTGGGTCAGCGTTGTACATCAGATCATGAGGCAATGTTAAACATGAAAACCGAGTTCATGACTTTATGGGATGGATTTACCACCGATCAGAATGCGTGCATTATGGTCCTTGCAGCAACCAATCGTCCCTCGGAACTTGATGAGGCCATCTTACGGCGGTTTCCTCAAGCCTTTGAAATTGGACTTCCAGACGAAAGGGAGAGGGCTGAGATATTTAAGGTTATCTTAAAGGGTGAGAGAGTTGAAGACAACATTCGCTTTGATCATATAGCTGCCTTATGTGAGGGATATACTGGTTCAGATCTGTTTGACCTCTGCAAGAAGGCTGCCTATTTTCCCATTAGGGAACTGCTGGATAAAGAAAGGCAAGGGAGAAATGCTCCTTTTCAGGAACCAAGGTGCTTGGCACAGTCAGATTTGGAGAAGGCTCTCACCACTTCACGGAAAACAAAGGTTGCTGCTGGTGAATACAGCGGATTAAATGTACAGTCATGA 1065 0.4563 MAGSSETKFVQDLLLYAASAGLSCLVLFAGLRHLDPNRETSKKALQHKKDLAKRLGRPLIQTNAYEDVIACDVINPDHIDVKFDSIGGLQTIKQALFELVILPLKRPELFCHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGSVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFVDEVDSFLGQRCTSDHEAMLNMKTEFMTLWDGFTTDQNACIMVLAATNRPSELDEAILRRFPQAFEIGLPDERERAEIFKVILKGERVEDNIRFDHIAALCEGYTGSDLFDLCKKAAYFPIRELLDKERQGRNAPFQEPRCLAQSDLEKALTTSRKTKVAAGEYSGLNVQS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0171 354 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Lele01g0171 354 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 310 IPR027417 -
Lele01g0171 354 SMART AAA_5 118 254 IPR003593 -
Lele01g0171 354 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 32 342 - -
Lele01g0171 354 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Lele01g0171 354 Gene3D - 80 339 IPR027417 -
Lele01g0171 354 Gene3D - 253 335 - -
Lele01g0171 354 CDD AAA 116 252 - -
Lele01g0171 354 Pfam AAA+ lid domain 275 309 IPR041569 -
Lele01g0171 354 FunFam ATPase family AAA domain-containing protein 1 80 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0171 Lele-ChrLele01 962871 965209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0171 37 321 Calmodulin-binding Proteins AT3G56690 32.180 1.33e-39 147