Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0161 ATGAAGATCGTCAACTTTTACGTCCACATGCCTCACCTCCTCCACCTTCATCACCACGACAAGAAGCACGCCAAACACGCCCCTAGAGGGTGCTTGGCCGTCCTCGTCGGTCAAGGAACTCAGCAACAGAGATTTGTGATTCCTCTCATGTACTTCAATCACCCTCTCTTCATTCACTTGCTGGAGGAAGCCGAGCAAGAATATGGGTTCCATCAGAAAGGCCTCCTCACCATTCCTTGCCCCGTAGACGACTTCCGTACCGTTCAAGAACTGATTGATCAGGAAAACCACCACCACCATGCTTGGTGCTTTAAACCTTGA 321 0.5047 MKIVNFYVHMPHLLHLHHHDKKHAKHAPRGCLAVLVGQGTQQQRFVIPLMYFNHPLFIHLLEEAEQEYGFHQKGLLTIPCPVDDFRTVQELIDQENHHHHAWCFKP 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0161 106 Pfam Auxin responsive protein 21 91 IPR003676 GO:0009733
Lele01g0161 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0161 Lele-ChrLele01 926077 926397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0161 28 99 Calmodulin-binding Proteins AT2G24400 41.667 7.95e-16 67.4