Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0160 ATGGGCCATTGCTGCAGTAAAAACCTTTCTGCCGTCGACAATGAAACTTCCCACCCTGACCCTCACCATAAACCTCCTCATTCCTCTGCATCGCCCCACTCTCCTGTCCATTCGGTCTCCGGAGCCACCGTTGCCACCCCTGCCCTCCATAGTTACACAAACTCCTACTCCGCCAGTCCCTTTAACAGCCCCCTCCCACCGTCTCCGGGCGGGACTCCGGGTAGGAAATTTCGATGGCCTCTGCCGCCTCCGTCGCCCGTGAAGCCGATCATGGCGGCAATACTGAAACGGCAGGGGAAGGCTCAGCCTAAGGAGGGGTCCATACCGGAGGGGCAAGGGGAAACCACGCCGGGTGAGAGGCCGCTGGATAAGAGCTTTGGGTTTGCCAAGAATATTGGCGCCAAGTATGAACTGGGGAAAGAAGTAGGTCGAGGACACTTTGGTCATACTCACCTGGCCAAAGCAAAGAAAGGAGTGCTTAAGGGGCAGTCTGTAGCTGTCAAAATAATATCCAAAGCTAAGATGACAACAGCCATAGCAATTGAAGATGTACGGAGGGAGGTGAAAATGTTGAAAGCCCTGTCTGGTCATAAAAATGTAGTCAAGTTTCACGATGCATTCGAGGATGCCAATAGCGTCTACATAGTGATGGACTATTTATTCTTAGGGGATGACGTGTTCTTGTTCTTACCAGATTGTGTGAGGGAGGAGAACTACTCGATAGAATTCTCTCAAGGGGGAAGATACACAGAACAAAATGCTAAAGCAATTCTTGTACAAGCTCTAAACGTAATGGCCTATTGTCATCTTCAAGGAGTTGTTCATCGTGATCTAAAACCAGAGAATTTTCTCTTTGCCTCAAAAGATGACGATGCTCTGATGAAGGTCATTGACTTTGGTCTATCCGATTTCGTGAGGCCAGATCAACGCCTGAGTGAGGTTGTTGGCAGTGCCTACTATGTTGCCCCTGAAGTGCTCCATAGATCTTACAGTGTTGAAGCAGATTTATGGAGTATTGGGGTAATAACATACATATTATTATGTGGAAGTAGACCATTCTGGGCACGCTCTGAATCAGGAATCTTTCGCTCTGTGCTTAAAGCTAATCCTAACTTCGATGATTCGCCTTGGCCGTCCGTATCGCTGGAGGCTAAAGACTTTGTAAAGAGACTTTTGAACAAGGATCTCAGGAAAAGGATGAGTGCTGCCCAAGCATTAACTCACCCGTGGTTGAGAAATGAAAATCAAGCCATTCCATTAGACATTTTAATCTACAAACAAGTCAAGTCATACTTACATGCCACACCATTGAGACGCGCCGCACTCAAGGCTCTCTCTAAAGCATTGACAGAAGATGAGCTTATCTACCTTAGACCACAGTTTAGCCTCTTGGAACCAAAAAATGGCTGCGTTTCCCTCGACAATTTTAGAGCGGCTCTTATGAAAAATGCAACTGATATGATGAAGGAAGCCAAGGTCCCGGACATTCTAAATTCGGTGAGACATCTTTGCTCTATGGATTCACCCGCCTCCGTAAAAATGGACTTCGAAGAGTTTTGTGCTGCTGCAATTAGTGTATACCAGCTCGAGGTTCATGAAGAGTGGGACAGAATCTCGAAAACAGCATTCCAATATTTCGAACAAGCAGGGAACAGGGTCATTTCAGTGGAGGAGTTGGCAGAGGAGATGAATCTGGGGGCTTCGTCTTACTCTTTACTGGGCAATTGGATCCGAGAATCCGACGGAAAATTCAGCTTTGTCGGATATACTAAGTTTATGCACGGCATCACTATTCGCAGTTCAAACACAAGACAGCGACAGAACGCATGTTTGGCAAATTTTGTGTAA 1848 0.4686 MGHCCSKNLSAVDNETSHPDPHHKPPHSSASPHSPVHSVSGATVATPALHSYTNSYSASPFNSPLPPSPGGTPGRKFRWPLPPPSPVKPIMAAILKRQGKAQPKEGSIPEGQGETTPGERPLDKSFGFAKNIGAKYELGKEVGRGHFGHTHLAKAKKGVLKGQSVAVKIISKAKMTTAIAIEDVRREVKMLKALSGHKNVVKFHDAFEDANSVYIVMDYLFLGDDVFLFLPDCVREENYSIEFSQGGRYTEQNAKAILVQALNVMAYCHLQGVVHRDLKPENFLFASKDDDALMKVIDFGLSDFVRPDQRLSEVVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWARSESGIFRSVLKANPNFDDSPWPSVSLEAKDFVKRLLNKDLRKRMSAAQALTHPWLRNENQAIPLDILIYKQVKSYLHATPLRRAALKALSKALTEDELIYLRPQFSLLEPKNGCVSLDNFRAALMKNATDMMKEAKVPDILNSVRHLCSMDSPASVKMDFEEFCAAAISVYQLEVHEEWDRISKTAFQYFEQAGNRVISVEELAEEMNLGASSYSLLGNWIRESDGKFSFVGYTKFMHGITIRSSNTRQRQNACLANFV 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0160 615 MobiDBLite consensus disorder prediction 1 40 - -
Lele01g0160 615 Gene3D Phosphorylase Kinase; domain 1 119 220 - -
Lele01g0160 615 CDD STKc_CAMK 135 410 - -
Lele01g0160 615 SUPERFAMILY Protein kinase-like (PK-like) 126 434 IPR011009 -
Lele01g0160 615 Gene3D - 450 524 - -
Lele01g0160 615 FunFam CDPK-related kinase 1 129 224 - -
Lele01g0160 615 MobiDBLite consensus disorder prediction 56 83 - -
Lele01g0160 615 Gene3D Transferase(Phosphotransferase) domain 1 240 430 - -
Lele01g0160 615 ProSiteProfiles Protein kinase domain profile. 136 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0160 615 Pfam Protein kinase domain 136 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0160 615 FunFam CDPK-related kinase 1 447 524 - -
Lele01g0160 615 Gene3D - 431 568 - -
Lele01g0160 615 MobiDBLite consensus disorder prediction 97 123 - -
Lele01g0160 615 ProSitePatterns Protein kinases ATP-binding region signature. 142 168 IPR017441 GO:0005524
Lele01g0160 615 SUPERFAMILY EF-hand 435 596 IPR011992 -
Lele01g0160 615 FunFam CDPK-related kinase 1 240 425 - -
Lele01g0160 615 PANTHER SERINE/THREONINE-PROTEIN KINASE 120 577 - -
Lele01g0160 615 MobiDBLite consensus disorder prediction 62 83 - -
Lele01g0160 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Lele01g0160 615 SMART serkin_6 136 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0160 Lele-ChrLele01 921366 924368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0160 59 600 EF-hand Containing Proteins AT3G50530 55.113 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele01g0160 Pkinase 3.6e-63 CL0016