Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0157 ATGGGTGAATTTGGCGTTTCGGACAAGGAAGATGCAAAAAATAGCAGGAATGGTGGTGTTGGGTTGGGTATGAGGGTGCAGAGGCAGAACCTTGAAGCATTCCCTAGTAAGAGCATGATGATGATGGTTCCCCCTCCTCATAATCATCACGATCCTCCACTATATGGTTCCTCCTTTGCTACTGCTGCTGGTGATGGTGATGGTCCTACAACTTGTAAGTCCCTGACTGATTATACAAACCATTTTGTTAATGCTGCTTCAGCTTCTGTTGCCGCCCTTGTTAGACCCTTGCAGCCTTTTCACGTTTCTGCTTCAACAGCCTTCAAATCCTCAGGTGGGGTGATGGCGGCTTCACTGGGATTTCATTTCACAAATGCACAATGGAAGGAGCTCGAAAGACAAGCTATGGTATACAAATACATGATGGCTTCTATACCTGTTCCTCCTCATCTGCTTATCCCTGTGCCTGCTTCTCGCTCTCCCCTGGATACCGGTTTCAATCTAAGGTTCTCAAGCAGTAGTAATGCAGAGCCAGGGAGGTGCAGAAGAACAGACGGGAAAAAATGGAGATGTTCCAGAGACGTAGCCCCTAACCACAAGTATTGCGAGCGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCATGTGGAAATTCAAGCCACCACTAACAATAATCAGCAAATCAACAGAGCTAGCCAAGATTATCCTTCGTTATCTACTCCTACCATGACTACCAGTCAGCCATACTTTGAATCTTCACTTGCTTCTTTTCCAAGAGGCGCGGACTGGATGCTGAAAGGTGACCCTAATCCCATGGATCCACAATGGCATCCTCTGGTACAGAACAAACTCGGATTGAATACGGGAAGTTCCTGTAACAAGGACGCCTCGATTTCAATCACTCGTTCCAATGGCCATCTGTATACCAATTCGTATGATGTTTTCAGTTCTGAACGAGACCAACACGACAAGCAATCCCCTTTGTACCTCAATCCTCGGTCTGTAAAACCAAGAGCTTCCATTGATGCTTGGTCGAGTGCAGAAACCAATGCCAACCAAAGGAGCTCTGTTGGATCAAATAACAGGTTATCGCTTTCTTCTCTTGACGTGTCAGTGGGTGGTGATGTGGAGGAACAAATGGGTTCTGTTAATGTGGGCTTGGGCCAAATGAATCCCCCTGCGAATTGGGCTGATTGTTCAACTCCTGGGGGCCCACTAGCGGAAGTGTTGAGGCCCAGCAAGGTGGCGACCACTACAAATGAGAGCCCTATGGCAACAATGGTGTCATCTCCATCTGGGGTTCTTCAGAAGACGCTTGCTTCATTCTCTGATAGTAGCAGCAGTAGCAGCCAGAGGACGAGGGTTGGGTCTTCCAGGGCCAGTTCTGATATGGCCTTCCTGTGCTTTAATCGCGCCGAATTACCTTCTTAA 1434 0.4784 MGEFGVSDKEDAKNSRNGGVGLGMRVQRQNLEAFPSKSMMMMVPPPHNHHDPPLYGSSFATAAGDGDGPTTCKSLTDYTNHFVNAASASVAALVRPLQPFHVSASTAFKSSGGVMAASLGFHFTNAQWKELERQAMVYKYMMASIPVPPHLLIPVPASRSPLDTGFNLRFSSSSNAEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKHVEIQATTNNNQQINRASQDYPSLSTPTMTTSQPYFESSLASFPRGADWMLKGDPNPMDPQWHPLVQNKLGLNTGSSCNKDASISITRSNGHLYTNSYDVFSSERDQHDKQSPLYLNPRSVKPRASIDAWSSAETNANQRSSVGSNNRLSLSSLDVSVGGDVEEQMGSVNVGLGQMNPPANWADCSTPGGPLAEVLRPSKVATTTNESPMATMVSSPSGVLQKTLASFSDSSSSSSQRTRVGSSRASSDMAFLCFNRAELPS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0157 477 SMART QLQ_2 121 157 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele01g0157 477 ProSiteProfiles QLQ domain profile. 122 157 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele01g0157 477 Pfam WRC 176 218 IPR014977 -
Lele01g0157 477 PANTHER GROWTH-REGULATING FACTOR 5 104 360 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele01g0157 477 MobiDBLite consensus disorder prediction 1 22 - -
Lele01g0157 477 Pfam QLQ 122 155 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele01g0157 477 ProSiteProfiles WRC domain profile. 175 219 IPR014977 -
Lele01g0157 477 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0157 Lele-ChrLele01 904425 906805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0157 113 448 GRF Transcription Factor Family AT5G53660 34.232 9.70e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele01g0157 WRC 2.2e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0157 01 904425 906805 Lele02g0162 02 895840 898674 ECH
Lele01g0157 01 904425 906805 Lele01g0157 01 904425 906805 ECH
Lele01g0157 01 904425 906805 Lele03g0165 03 881250 884527 hybridization
Lele01g0157 01 904425 906805 Lele04g0161 04 901616 904290 hybridization