Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0148 ATGTGGGGAGAAATGGGTGATTTGAAAGCGGTGGAAGCAAGGGAGAGCGAGAAGGAGAGGGAGAAAACAGAGGATGAGAAGGAAAGTGGAACAGAGAACAAAGAGGGAGAATTGAGTGGTCTGATGAGGTGGGAGAAATTCTTGCCCAAGATGATATTGAGGGTTCTCTTGGTTGAAGCTGATGATTCCACTCGCCAGATTATCGCTGCGCTTCTCAGGAAATGCAGCTATAGAGTGGCTGCTGTTCCTGATGGCCTAAAAGCTTGGGAAATACTGAAGGGAAGATCACACAACATCGATCTAATACTGACAGAAGTAGATTTGCCTTCCATATCTGGCTATGCGCTTCTCACCTTAATTATGGAGCATGAGATTTGCAAAAGCATTCCTGTTATAATGATGTCCTCACAAGATTCAATTAGCACAGTATACAAGTGCATGTTGAAAGGTGCGGCTGACTACCTTGTTAAGCCCATTAGGAAAAATGAGCTGAGGAATTTGTGGCAGCATGTTTGGAGAAGGCGATCATCAGTAATCGGTTTAAATGGTCTTCAAGATGAGAGTGTTGCGCAACAGAAGGTTGAAGCCACTGCCGAAAATAATGCTGCTAGTCGTTCAAGTGGAGATGCCGCATGCATTCAAAAAAATAGGGAATTAATTGAGAAAGGAAGTGATGCTCAGAGCTCCTGTACAAAGCCTGATTTGGAAGCTGAAAGTGCCCCTCTGGAAAATGTTGAGCAATTTGCTCATCTAAGATATGGTGACTCGAATCCGAGCTATGAAAAGATTCAGGAGGTTAAAGTTTGTATTCGTTTAGGCCACACATCGATTGTGAATGATAATCATGCTGGAGGATCAACCGTGGATATCCGCACAAATGGTAACACAAGCACAACTCATGGCACGGATGGCTGTCCAGAGAATAGGAGTGCTATTATCAGTGTTGAAGCTCATGATAATCCCTATGTTCAAATTAGCTCTCCCAAGGAATCTATAGACTTGATTGGAGCGTTTCATGCTAATTCAAAATGCAGTCCCAAAAGTTCCGCAATCAATTGCGCTGGCATGTTTGACTTCTCTCCACATTTAGATCTTTCCTTAAGAAGAGATCATCCCAGCAGCTTTGAGAATGAAGTCTCCAAAGATAGGCAAACCCTCACGCATTCCAATGCTTCAGCTTTCAAACGGTATACCAGCGGACAATTGCAAGCACCACCAGTTGGTCTCATTAACTTTTGTGATCCAGAGAGAGAACAGAGAACAAATTGTGAGAAAAATAACTCTTATGTTGCTGCTGGCTATAACTCAGATAGTTCAACACCGAGTATGCAAAGAAGTATTGTGTCATCCACTACACCCCAATCTAGAGAATCTAAACTTGCAACTTCATTCTCCCAGCAGCCAAGTCCTCTCCCGATTCCAGTTAGAGGAATAAGGTTCAACGATCTATGCAGATCCTATGGTTCTGTCCCTCCTCAAATGTTTTGTACAGAGTCAGATCCACCAACAGGGTCAAGTCCAAGATCTGCAGTGCACCTGGAATCTACCTTTCAAACCAATGCATATTGTCTGTCTAATGTCAAAGAAAATAGTTCAGAGCAGCTTTATGAAGCTCGAGGTCAAAGTGGAAACAACCTTGCAAGCCACATTGTTTATGTGCAGGATTACGAGTTGGAAAATGTGGAAGATCGAGGACGGATTTCTCCTGCAACTGATCAAAGTGGAAGCAGTAGTTTCTGCAATGGAAATTTGAGTCGCATGAACAGCATTGGCTACGGAAGCAACTGTGGAAGTAACAGCAACGTTGATCAGGCTGTCATAGTCAGGACCGCTTCAGAGGTGAAGAATGAAGACCTCACAAACAATGCAAATTCTCATCGATCCATTCAAAGAGAAGCAGCTCTAAACAAGTTCCGTTTGAAAAGGAAACAGAGATGTTATGAGAAGAAGGTTCGGTATGAAAGCAGAAAGAAACTTGCAGAGCAGCGTCCCAGGGTGAAAGGACAATTTGTTCGTCAAGGGCAACCTGAACCTCAGGGTGCAGATAAAGATGGCTGA 2058 0.4349 MWGEMGDLKAVEARESEKEREKTEDEKESGTENKEGELSGLMRWEKFLPKMILRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEILKGRSHNIDLILTEVDLPSISGYALLTLIMEHEICKSIPVIMMSSQDSISTVYKCMLKGAADYLVKPIRKNELRNLWQHVWRRRSSVIGLNGLQDESVAQQKVEATAENNAASRSSGDAACIQKNRELIEKGSDAQSSCTKPDLEAESAPLENVEQFAHLRYGDSNPSYEKIQEVKVCIRLGHTSIVNDNHAGGSTVDIRTNGNTSTTHGTDGCPENRSAIISVEAHDNPYVQISSPKESIDLIGAFHANSKCSPKSSAINCAGMFDFSPHLDLSLRRDHPSSFENEVSKDRQTLTHSNASAFKRYTSGQLQAPPVGLINFCDPEREQRTNCEKNNSYVAAGYNSDSSTPSMQRSIVSSTTPQSRESKLATSFSQQPSPLPIPVRGIRFNDLCRSYGSVPPQMFCTESDPPTGSSPRSAVHLESTFQTNAYCLSNVKENSSEQLYEARGQSGNNLASHIVYVQDYELENVEDRGRISPATDQSGSSSFCNGNLSRMNSIGYGSNCGSNSNVDQAVIVRTASEVKNEDLTNNANSHRSIQREAALNKFRLKRKQRCYEKKVRYESRKKLAEQRPRVKGQFVRQGQPEPQGADKDG 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0148 685 SUPERFAMILY CheY-like 53 187 IPR011006 -
Lele01g0148 685 MobiDBLite consensus disorder prediction 8 36 - -
Lele01g0148 685 SMART REC_2 53 168 IPR001789 GO:0000160
Lele01g0148 685 Pfam Response regulator receiver domain 55 166 IPR001789 GO:0000160
Lele01g0148 685 Coils Coil 8 33 - -
Lele01g0148 685 Gene3D - 51 267 - -
Lele01g0148 685 ProSiteProfiles CCT domain profile. 631 673 IPR010402 GO:0005515
Lele01g0148 685 PANTHER TWO-COMPONENT RESPONSE REGULATOR 54 211 IPR045279 GO:0009736
Lele01g0148 685 MobiDBLite consensus disorder prediction 434 468 - -
Lele01g0148 685 ProSiteProfiles Response regulatory domain profile. 54 172 IPR001789 GO:0000160
Lele01g0148 685 Pfam CCT motif 631 673 IPR010402 GO:0005515
Lele01g0148 685 MobiDBLite consensus disorder prediction 1 36 - -
Lele01g0148 685 CDD psREC_PRR 55 158 - -
Lele01g0148 685 MobiDBLite consensus disorder prediction 656 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0148 Lele-ChrLele01 860352 865015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0148 330 675 Response Regulator Gene Family AT5G24470 29.972 1.91e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele01g0148 Response_reg 1.7e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0148 01 860352 865015 Lele02g0153 02 844555 848735 ECH
Lele01g0148 01 860352 865015 Lele01g0148 01 860352 865015 ECH
Lele01g0148 01 860352 865015 Lele03g0156 03 842192 846888 hybridization
Lele01g0148 01 860352 865015 Lele44g0274 44 1985351 1990431 hybridization