Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0117 ATGAAGGAAAATTCACACAAACAGAATTACGGAGTGGATTCGAGAACCTGCACTAGCTCTGAACTTCAACAGCCGATGTTTTGGTCAAAGAAAATGAAAACGTTGCACTGCCAAAACCCTCCTTTGGATGTCCTGCCAGCAACGGGGGTGATGGGAAAATGGAACATTAAACAACAGAAGAGGTTGATTCAGGAAATCACTGGCTATTTTATTTTGTCAGTTCATTATCGTCATTTTCTCCCCATAGAAACTCACGAATGGACTATTCCCACTCCTATATATGCTACTCATAAGCTTAGCCAACCATTTATCAAAGCAAAAGTGATAAAGTTTAATAAGTTGTTGAAGGCAGAGAAAGTCATGGCTGTAAGAGATGATGGGGCTGACCTGAGAGGAACTATTCCCCTGAAGCAGCACTTTGTGCTGGTACATGGCGTAGGAGGAGGAAGCTGGTGCTGGTACAAAATCCGGTGTCTAATGGAGAACTCTGGCTACAAGGTTTCCTGTGTAAACCTCAAAGGTTCTGGGATTGATCGAACTGACGCAGATTCTGTTCTTTCTTTTGATGATTACAACAAACCTCTTATGGATATCATATCTGCTCTGCCAGAAAACGAACAGGTGATACTTGTGGGACATAGCGCAGGAGGGTTGAGCATTACACAAGCCAGTCACAAGCTTCCCAAGAAGATTCGTTTGGCAGTCTATGTAGCAGCAACCATGCTAAAGTTGGGATTCTGGACAGAAGAAGATCACAAAGACGGGGAACCGGACTTATCTGAGTTTGGGGATGTGTTCGAGCTTGGATTTGGACAGGGACAGGATAAGCCTCCAACCAGTGTTTTGGTCAAGAAAGAATTTCAACGCAAAATCATCTACCCTTTGTGCCCTTATGAGGATTCGACGTTAGCTGCGATGCTGTTGAGGCCAGGGCCACTTCAGGCACTGTCGAACGCGCGATTCACAGAGGAAGAAGCGGGTGAAGTAGAGAAGGTGCCGCGAGTGTTCATAAAGACAATGCAAGACAAGGTGTTGAAGCCAGAGCAACAAGAGGCCATGATCAAGAGATGGCCGCCATCTATTGTGTACGAACTGGACACTGACCATAGCCCCATGTTCTCCTCTCCTTTCCTCCTCTTTGGCTTCCTTGTTAAAGCTGCTGCTTTTGACCTTCCATCTGGCTGCGCCTAG 1191 0.4584 MKENSHKQNYGVDSRTCTSSELQQPMFWSKKMKTLHCQNPPLDVLPATGVMGKWNIKQQKRLIQEITGYFILSVHYRHFLPIETHEWTIPTPIYATHKLSQPFIKAKVIKFNKLLKAEKVMAVRDDGADLRGTIPLKQHFVLVHGVGGGSWCWYKIRCLMENSGYKVSCVNLKGSGIDRTDADSVLSFDDYNKPLMDIISALPENEQVILVGHSAGGLSITQASHKLPKKIRLAVYVAATMLKLGFWTEEDHKDGEPDLSEFGDVFELGFGQGQDKPPTSVLVKKEFQRKIIYPLCPYEDSTLAAMLLRPGPLQALSNARFTEEEAGEVEKVPRVFIKTMQDKVLKPEQQEAMIKRWPPSIVYELDTDHSPMFSSPFLLFGFLVKAAAFDLPSGCA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0117 396 Gene3D alpha/beta hydrolase 136 388 IPR029058 -
Lele01g0117 396 PANTHER METHYLESTERASE FAMILY MEMBER 137 387 IPR045889 -
Lele01g0117 396 FunFam putative methylesterase 11, chloroplastic 135 389 - -
Lele01g0117 396 Pfam Alpha/beta hydrolase family 140 376 IPR000073 -
Lele01g0117 396 SUPERFAMILY alpha/beta-Hydrolases 137 378 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0117 Lele-ChrLele01 687834 694262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0117 137 241 Miscellaneous Gene Families AT5G10300 45.714 9.33e-28 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1933 26 22887406 22892519 Lele01g0117 01 687834 694262 CCT
Lele27g0185 27 1395623 1400001 Lele01g0117 01 687834 694262 CCT
Lele28g1941 28 22689770 22705656 Lele01g0117 01 687834 694262 CCT
Lele01g0117 01 687834 694262 Lele03g0117 03 659997 664027 hybridization
Lele01g0117 01 687834 694262 Lele04g0114 04 675137 677872 hybridization