Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0111 ATGGGTACTCTTTGCCCCGATCATGTGTCTCCAGACAAGGAGAGTATCATCAGAGAGCTCGTTGAGGGCAAGGAGTGCGCTTCCCAGCTCAAGCTTTTGTTTCAGAAGCCTTCCGGGCCTGACGGGACTCCCTCTGCCGACCAACTCATCGCCAAAATTTTGAGATCCTTCACCCAAAGTATTTCCTTTTTGACTTCCTCCGAAGCCAGCGGCGAGGTTGGTCAGATTTCGGCGATTTCCGGTCTGAGTGGGTCTCCTCTCGGAACTTCTTCCCGCAATGGCCGGAGGCCGGACGAATCCGGCCAGAGCAGGAAGAGCTCGCCGCCGCCGCCCACAAAGGATCGGGGAGGCTGCTACAAAAGAAGGAGTTACTTTAGATGCACTCGGAAGCACGATCAAGGTTGCAAGGCGATCAAACAGGTTCAGCGCATACAGGAGAATCCAGAAATGTTCCTAACGACGTACATTGCATTTCACACATGCAAAGACAACCCCAAGGCTCCCGAAATGGTGGTCACAGATTCTGGTAATTGGGAATCATATCTGGAACAGCCTGAATCTAAGAAGACAGCGAACGAAGATCAAAAGGAGCATGGTCGTCGTCCTCTGATCAGCTCGTCGTCGTCAACCCCAAACATAAAGCAGGAATATCCCAAGGAGGACACACCACTGAGTGAAATAACAGACAGCTTGGAGCCTAATTTTTGGTCAGATTTGAAGGTTGACTTTGTTCTTTCGGAGCCCTTGAAGATGTCGACTGAATATAATGCAGATGCCGTGTATTCATATAGTCCGGCTACTATGGATTTTGGAGTGGATCATCATCTCCGCTTTGATTGA 840 0.5012 MGTLCPDHVSPDKESIIRELVEGKECASQLKLLFQKPSGPDGTPSADQLIAKILRSFTQSISFLTSSEASGEVGQISAISGLSGSPLGTSSRNGRRPDESGQSRKSSPPPPTKDRGGCYKRRSYFRCTRKHDQGCKAIKQVQRIQENPEMFLTTYIAFHTCKDNPKAPEMVVTDSGNWESYLEQPESKKTANEDQKEHGRRPLISSSSSTPNIKQEYPKEDTPLSEITDSLEPNFWSDLKVDFVLSEPLKMSTEYNADAVYSYSPATMDFGVDHHLRFD 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0111 279 MobiDBLite consensus disorder prediction 182 226 - -
Lele01g0111 279 Gene3D WRKY domain 97 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele01g0111 279 MobiDBLite consensus disorder prediction 78 119 - -
Lele01g0111 279 Pfam WRKY DNA -binding domain 120 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g0111 279 MobiDBLite consensus disorder prediction 78 96 - -
Lele01g0111 279 MobiDBLite consensus disorder prediction 186 201 - -
Lele01g0111 279 ProSiteProfiles WRKY domain profile. 122 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g0111 279 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 183 IPR044810 GO:0003700
Lele01g0111 279 MobiDBLite consensus disorder prediction 202 216 - -
Lele01g0111 279 SMART WRKY_cls 113 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g0111 279 SUPERFAMILY WRKY DNA-binding domain 117 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0111 Lele-ChrLele01 663967 665736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0111 13 174 WRKY Transcription Factor Family AT3G56400 33.163 5.63e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele01g0111 WRKY 5.7e-11 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0449 26 2828616 2834154 Lele01g0111 01 663967 665736 CCT
Lele27g1646 27 21976384 21981438 Lele01g0111 01 663967 665736 CCT
Lele28g0444 28 2811732 2817195 Lele01g0111 01 663967 665736 CCT
Lele01g0111 01 663967 665736 Lele03g0112 03 628797 630573 hybridization
Lele01g0111 01 663967 665736 Lele04g0108 04 632708 634432 hybridization