Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0110 ATGAAAGAGGCCACTGGTTCTTTAATACAGCGTGCTTGTGAATTAGCCAGACACCTGGAATCAAATTTTCCCAACTTGGCTAACCAACCCGATACACTGTTCACGTTCATTGATGAGATAGTGAACACGTTCTTGGCCGCAAAAGAAAGCCTGAGACTGTTTTCGCAGCACCCAACGCCACCTTCTTCTTACTTTGCTCATCAGCCGATCAGATCCACTAGTCATGCACAGCCAATGGATCAGTCGATTCGTGATCGAATGCAACGACCACGATCAACCCAAATGAGACTGGGAAAGAGGAAAAGTGATTCGGAGACGAAGACAGTGGTGGCACCGGCGCCTAGGTTTGGGAACAAAGAGATTCCCCCAGAAGATGGTTTCACTTGGCGAAAATATGGCCAGAAGGAGATATTTGGCTCTAACTACCCAAGGAGTTATTACAGATGCACCCACCAGAAATTATATAAATGTCCTGCGAAGAAGCAAGTACAGAGACTTGATAACAACCCTAACACATTTGCAGTAACATACCGAGGCAGTCACAGCTGCATTTTGTCCTCCACAGCTCCATCCTCAGTTCCACCTCCACACCTTTTCGCTGACTTCAACACCACCGTTTCCCCTCAGCTGTCTTCTTCTTCAGCTTCAGTTTTCCGGTGGCTCCCCTCGCCCCACCTCGGCCTCTGCACCGGTGCCGCCGCCGCCCCGACTGGTGTGGATGCCGGTACTGCCAGTGGAGGCCCCTCCACTTCGAGATACGGTGGTAGTACTGAATTTATGGTGGCAGATATAGCTGATGCTATGTTCAATTCTACTGGGAGTAGTGCCATTGAATCCTTCTTGTTTCCTGAAGACAAATGGGAACTCGGTGACAAGAAAAATTGA 885 0.4904 MKEATGSLIQRACELARHLESNFPNLANQPDTLFTFIDEIVNTFLAAKESLRLFSQHPTPPSSYFAHQPIRSTSHAQPMDQSIRDRMQRPRSTQMRLGKRKSDSETKTVVAPAPRFGNKEIPPEDGFTWRKYGQKEIFGSNYPRSYYRCTHQKLYKCPAKKQVQRLDNNPNTFAVTYRGSHSCILSSTAPSSVPPPHLFADFNTTVSPQLSSSSASVFRWLPSPHLGLCTGAAAAPTGVDAGTASGGPSTSRYGGSTEFMVADIADAMFNSTGSSAIESFLFPEDKWELGDKKN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0110 294 ProSiteProfiles WRKY domain profile. 124 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g0110 294 MobiDBLite consensus disorder prediction 73 117 - -
Lele01g0110 294 SMART WRKY_cls 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g0110 294 MobiDBLite consensus disorder prediction 82 106 - -
Lele01g0110 294 Gene3D WRKY domain 114 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele01g0110 294 SUPERFAMILY WRKY DNA-binding domain 121 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele01g0110 294 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 196 IPR044810 GO:0003700
Lele01g0110 294 Pfam WRKY DNA -binding domain 124 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0110 Lele-ChrLele01 659704 661595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0110 3 285 WRKY Transcription Factor Family AT2G40740 32.923 4.57e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele01g0110 WRKY 6.3e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0110 01 659704 661595 Lele03g0111 03 624550 626460 hybridization
Lele01g0110 01 659704 661595 Lele04g0107 04 628409 630421 hybridization