Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele01g0110 | ATGAAAGAGGCCACTGGTTCTTTAATACAGCGTGCTTGTGAATTAGCCAGACACCTGGAATCAAATTTTCCCAACTTGGCTAACCAACCCGATACACTGTTCACGTTCATTGATGAGATAGTGAACACGTTCTTGGCCGCAAAAGAAAGCCTGAGACTGTTTTCGCAGCACCCAACGCCACCTTCTTCTTACTTTGCTCATCAGCCGATCAGATCCACTAGTCATGCACAGCCAATGGATCAGTCGATTCGTGATCGAATGCAACGACCACGATCAACCCAAATGAGACTGGGAAAGAGGAAAAGTGATTCGGAGACGAAGACAGTGGTGGCACCGGCGCCTAGGTTTGGGAACAAAGAGATTCCCCCAGAAGATGGTTTCACTTGGCGAAAATATGGCCAGAAGGAGATATTTGGCTCTAACTACCCAAGGAGTTATTACAGATGCACCCACCAGAAATTATATAAATGTCCTGCGAAGAAGCAAGTACAGAGACTTGATAACAACCCTAACACATTTGCAGTAACATACCGAGGCAGTCACAGCTGCATTTTGTCCTCCACAGCTCCATCCTCAGTTCCACCTCCACACCTTTTCGCTGACTTCAACACCACCGTTTCCCCTCAGCTGTCTTCTTCTTCAGCTTCAGTTTTCCGGTGGCTCCCCTCGCCCCACCTCGGCCTCTGCACCGGTGCCGCCGCCGCCCCGACTGGTGTGGATGCCGGTACTGCCAGTGGAGGCCCCTCCACTTCGAGATACGGTGGTAGTACTGAATTTATGGTGGCAGATATAGCTGATGCTATGTTCAATTCTACTGGGAGTAGTGCCATTGAATCCTTCTTGTTTCCTGAAGACAAATGGGAACTCGGTGACAAGAAAAATTGA | 885 | 0.4904 | MKEATGSLIQRACELARHLESNFPNLANQPDTLFTFIDEIVNTFLAAKESLRLFSQHPTPPSSYFAHQPIRSTSHAQPMDQSIRDRMQRPRSTQMRLGKRKSDSETKTVVAPAPRFGNKEIPPEDGFTWRKYGQKEIFGSNYPRSYYRCTHQKLYKCPAKKQVQRLDNNPNTFAVTYRGSHSCILSSTAPSSVPPPHLFADFNTTVSPQLSSSSASVFRWLPSPHLGLCTGAAAAPTGVDAGTASGGPSTSRYGGSTEFMVADIADAMFNSTGSSAIESFLFPEDKWELGDKKN | 294 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele01g0110 | 294 | ProSiteProfiles | WRKY domain profile. | 124 | 182 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele01g0110 | 294 | MobiDBLite | consensus disorder prediction | 73 | 117 | - | - | |
Lele01g0110 | 294 | SMART | WRKY_cls | 123 | 185 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele01g0110 | 294 | MobiDBLite | consensus disorder prediction | 82 | 106 | - | - | |
Lele01g0110 | 294 | Gene3D | WRKY domain | 114 | 185 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lele01g0110 | 294 | SUPERFAMILY | WRKY DNA-binding domain | 121 | 183 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lele01g0110 | 294 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 9 | 196 | IPR044810 | GO:0003700 | |
Lele01g0110 | 294 | Pfam | WRKY DNA -binding domain | 124 | 183 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele01g0110 | Lele-ChrLele01 | 659704 | 661595 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele01g0110 | 3 | 285 | WRKY Transcription Factor Family | AT2G40740 | 32.923 | 4.57e-47 | 158 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lele01g0110 | WRKY | 6.3e-26 | CL0274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele01g0110 | 01 | 659704 | 661595 | Lele03g0111 | 03 | 624550 | 626460 | hybridization | |
Lele01g0110 | 01 | 659704 | 661595 | Lele04g0107 | 04 | 628409 | 630421 | hybridization |