Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0102 ATGTGCACCTTCCACCCTCTACTTCTATCTCTATCGGCTCTAAATGTGAATCCATTTTTGTGGTTTTGGCCCTCTCAATGCCTACCTTGTCTCTTTCACTCTCCTTCCCTATATAACCAGACATTCCCTTCCCCTGCCCCTTCAAGCTCTCCCACCCAAAATCCCCTGTCCTCAAACAGCTTCCCTATTCTATTCCACAATGGCTCTTTCACCATTCTCTTCCTTCTATCTTGTTTTCTTTCTTCTTCATCTTCAAAGCTCTTTTTGTTACTGTGGAGGCTGGCAAAGTGGCCACGTCACATTTTATGGTGGGGGGACGCATCTGGCACAATGGGGGGAGCTTGTGGGTATGGCAATTTGTACAGCCAAGGTTATGGGACGAACACGGCGGCACTGAGCAAGACTCTATTCAACAATGGCCTCAGCTGTGGGTCTTGCTACGAGATGCGATGCGACAATGACCCCAAATGGTGCCTTTCAGGCCTCATCACCGCTACCGCCACCAACTTCTGTCCTCCTAACTTTGGTTTATCCAATGACAACGGTGGGTGGTGTAACCCTCCTCTGCAGCACTTTGATCTCGCTGAGCCTGCTTTCTCAAAGATCGCTCAATACAAAGCTGGCATTGTTCCCATTTCTTTCAGAAGGTACTAA 654 0.4847 MCTFHPLLLSLSALNVNPFLWFWPSQCLPCLFHSPSLYNQTFPSPAPSSSPTQNPLSSNSFPILFHNGSFTILFLLSCFLSSSSSKLFLLLWRLAKWPRHILWWGDASGTMGGACGYGNLYSQGYGTNTAALSKTLFNNGLSCGSCYEMRCDNDPKWCLSGLITATATNFCPPNFGLSNDNGGWCNPPLQHFDLAEPAFSKIAQYKAGIVPISFRRY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0102 217 PRINTS Expansin signature 124 138 IPR002963 GO:0009664
Lele01g0102 217 PRINTS Expansin signature 199 212 IPR002963 GO:0009664
Lele01g0102 217 PRINTS Expansin signature 182 199 IPR002963 GO:0009664
Lele01g0102 217 PRINTS Expansin signature 163 173 IPR002963 GO:0009664
Lele01g0102 217 PRINTS Expansin signature 151 162 IPR002963 GO:0009664
Lele01g0102 217 PANTHER EXPANSIN-A15 99 216 IPR002963 GO:0009664
Lele01g0102 217 PRINTS Expansin/Lol pI family signature 133 151 IPR007118 GO:0005576
Lele01g0102 217 PRINTS Expansin/Lol pI family signature 207 217 IPR007118 GO:0005576
Lele01g0102 217 PRINTS Expansin/Lol pI family signature 111 129 IPR007118 GO:0005576
Lele01g0102 217 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 112 217 IPR007112 -
Lele01g0102 217 Pfam Lytic transglycolase 129 213 IPR009009 -
Lele01g0102 217 Gene3D - 97 217 IPR036908 -
Lele01g0102 217 SMART dpbb_1 129 214 IPR007112 -
Lele01g0102 217 SUPERFAMILY Barwin-like endoglucanases 103 216 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0102 Lele-ChrLele01 633629 634495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0102 100 216 Expansin Gene Family AT2G40610 79.832 2.93e-67 205