Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0100 ATGACTTTTAAGAGACGGAACGGTGGTCGCAACAAGCATGGCCGTGGACACGTTAAATTCATTCGCTGCTCCAACTGTGGTAAATGTTGCCCCAAGGACAAGTCAATTAAAAGATTTCTTGTGAGGAACATTGTTGAGCAAGCTGCAGTTAGGGATGTTCAAGAAGCCTGTGTATACGAGCAATACACCCTTCCCAAGCTGTATGTTAAGATGCAATATTGTGTCTCCTGCGCAATTCACTCCCATGTGGTGAGGGTTCGATCTCGCACAGATAGGAGGAACCGTGAACCCCCACAACGCTTCATCAGGCGCAGGGATGATCAACCAAGGCCTGGTCAGCCAGGGCAAGCACCTCGTCCTGCTGGAGCCGGAGCTCCTGCCCGTGCCTAA 390 0.5103 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDQPRPGQPGQAPRPAGAGAPARA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0100 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 123 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele01g0100 129 MobiDBLite consensus disorder prediction 89 110 - -
Lele01g0100 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele01g0100 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Lele01g0100 129 MobiDBLite consensus disorder prediction 86 129 - -
Lele01g0100 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele01g0100 129 FunFam 40S ribosomal protein S26 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0100 Lele-ChrLele01 620343 621900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0100 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 3.65e-69 202