Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0098 ATGGAACTGCTTTGTCTATATGATAGTTTCATTTCATCTTATAATTTGACATCCGCTGCGAGCAACGCACATGGGGAAGAAGCAAAAATGAGCACTGTTAGTTATATTGGCTTTCCTGCCCTATTCAGAGCGTCTCTCGACATTGATGGGGTTTCAAAGCAGCCGAAGAAGAAAAGCTCATGGAGTTTTATGGCCCAGGATACCCCAATCAGGTTGAATCATCAACTCTTTTGCAAACGATCAGACAGTGGGATTGAGGAGAACCACACAAGCAGGAGCGTCTCTAATTCCAAGAACAGGATGGAGGAATACAATATAGCTATGAAGAAAATGATGAGGAACCCTTATGAGTATCACCACGACCTCGGTATGAATTACACACTTATAACTGATAGCTTGATCGTGGGCTCCCAGCCACAAAAACCTGAAGATATAGGTCACCTCAAAAAGGAAGAGGATGTAGCATACATTCTAAACTTGCAGCACGACAAGGATGTGGAGTATTGGGGAATAGACTTACAATCTATAATAAGAAGATGCCGTGAACTCGGTATTCGTCACATGAGGAGGCCTGTAGTAGACTTCGATCCAAACTTTTTGAGAAATGCGTTGCCAAAAGCAGTTTCATCACTGGAATGGGCTATTTCTGAGGGAAAAGGAAGAGTTTATGTGCATTGCACTGCTGGACTTGGAAGAGCTCCGGCAGTGGCAGTTGCTTACTTGTTCTGGTTCTGTGACATGAATCTAAATGCAGCATATGATATGTTGACAGCAAAGAGACCTTGTGGACCCAATAAAAGAGCAATACGCGGGGCTACCTATGATTTGGCGAAGAATGATCCGTGGAAAGAGCCATTTGAGAGTCTTCCAGAACATGCATTTGAGGATGTAGCTTACTGGGAGAGGGATTTGATTCAAAATGGAGTCCGTTCTCTTCGTGGAACTTGA 948 0.4346 MELLCLYDSFISSYNLTSAASNAHGEEAKMSTVSYIGFPALFRASLDIDGVSKQPKKKSSWSFMAQDTPIRLNHQLFCKRSDSGIEENHTSRSVSNSKNRMEEYNIAMKKMMRNPYEYHHDLGMNYTLITDSLIVGSQPQKPEDIGHLKKEEDVAYILNLQHDKDVEYWGIDLQSIIRRCRELGIRHMRRPVVDFDPNFLRNALPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVAVAYLFWFCDMNLNAAYDMLTAKRPCGPNKRAIRGATYDLAKNDPWKEPFESLPEHAFEDVAYWERDLIQNGVRSLRGT 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0098 315 Coils Coil 94 114 - -
Lele01g0098 315 CDD DSP_laforin-like 124 271 IPR045204 GO:0019203|GO:0046838
Lele01g0098 315 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 202 261 IPR000387 GO:0016311|GO:0016791
Lele01g0098 315 Gene3D Protein tyrosine phosphatase superfamily 108 315 IPR029021 -
Lele01g0098 315 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 68 297 - -
Lele01g0098 315 ProSiteProfiles Dual specificity protein phosphatase domain profile. 125 282 IPR020422 GO:0006470|GO:0008138
Lele01g0098 315 SMART dsp_5 125 275 IPR020422 GO:0006470|GO:0008138
Lele01g0098 315 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 108 315 - -
Lele01g0098 315 Pfam Dual specificity phosphatase, catalytic domain 148 265 IPR000340 GO:0008138|GO:0016311
Lele01g0098 315 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 122 267 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0098 Lele-ChrLele01 611846 614412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0098 87 315 Protein tyrosine phosphatase (PTP) family AT3G10940 78.696 1.46e-140 397