Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0069 ATGGATGAATCATCTCTACCAGCGACGATGATCTTCTCGGGCTTTTTACCAACTGGGTCATTGCTAGACTCGTTGGTTCACATATCTAATGAAGTTGCCTCCATGGAAAAGTTCCCTTTCGTTCAACTCAGGAATGTCTCGTCCATGATCAGAAGGGTGAAGCTTCTTTCTTCTCTTTTCGAGGAGATTCAGGAAACATATTCCCCACTCCCTCCTTCTTCAATCCTGTGTTTCACAGAGCTCTTCTTTGTGATCAGAAGAGTGAAGCATTTGATCCAAGACTGCCAGGAAAGCAGCTCACTCTGGAGTCTCATACAGCTAGAGTTTATTTCCAACCAATTCTATGTGCTTGTGAAGGAGATGGGAAGGGCCCTAGATATCCTTCCTCTGAGCTTGCTTAATATCACAGCAGATATAAGAGAGCAAGTGGAACTTCTGCACAAGCAAGCAAAAGGGGTTGAGTTGTTCATTGATCCTCGTGAGCTGCAACGAAGAGAGCAGCTTCTGCATGTAATGGCCCATAACACTCTACAGAACAAGAAGAACAAGGGAATTCCTGAGTTTGGGAAAGTGCAACAAATATTAAGCAGCATTGGTTTGAGAACCCCATCAGACTATGATAGGGAAATTTCAAAGCTAGAGACTGAAGTTCAGAATCAGGCAGGTACGGGAGGGTTAATCGTTATGTCTAATATACATAATCTCATATCTCTGGTTACTTATTCAAAATCCATGATATTCAGAGACGGTGAAAACGAGATAGATGAAGACTGTAAGCCAGCAGTGTCCGCATTCACATATAAGAGCTCTGATAATTCTTTTTCTTCACCTTCTTCTCAGATGACATTGTCAGCACCTAATGTTCCTGATGAATTTCGATGCCCAATTTCACTTGATTTAATGAGAGATCCAGTGATTGTATCATCTGGGCATACATATGGTCGAATTTCAATTGCACAGTGGATAAACTCGGGACATCACACTTGCCCAAAAAGTGGGCAAAGATTAATCCACACTGCTCTCATACCCAACTACGCTTTGAAGAGTCTTGTACAGCAATGGTGTGATGAGAATAACGTCCCACTGAATGAGCCGACATCATCTTCTTCCTCAAGTTCGGAGGATCCCAACAGAAAGGACAACTCAAACGAAAATACCGTCGATCATATCTCTGCTAAAAAAGCAGCCATAGATGCTGTCAAAATGACAGCAGAGTTTCTAGTAGGAAAATTGGCAACTGGGTCGGCCGAAATCCAAAGGCAGGCTGCTTATGAGCTAAGATTACTAGCAAAAACTGGGATGAATAATCGAAGAATCATCGCCGAGGCAGGGGCAATTCCATTTCTAGTGACATTATTGGGATCCCATGATCCAAGAATCCAGGAGCATGCCGTCACGGCGTTGTTTAATCTCTCCATATTCGACAATAACAAGGTTCTGATAGTGGCAGCCGGAGCAGTGGATCACATAGTGCAAGTGCTTGAATCGGGGAAAACCATGGAAGCAAGAGAAAATGCGGCCGCAGCTATCTTTAGTTTGACTATGATTGATGACTGCAAGGTAGAAATCGGAGCTCGTCCGAGGGCCATACCCGCATTAGTAGGATTGTTAAGAGAGGGAACTCCTATTGGGAAAAGAGATGCTGCAACTGCCATTTTCAATCTTGCAGTTTACAATCCTAACAAGGCCAAAATCGTTAATGCCGGGGCTGTTTCTTTGCTTATCGAGTTGCTTATGGATGATAAGGCTGGGATCACAGATGATTCTTTGGCTGTCCTTGCTCTGCTTCTGGGTTGCTCTGAAGGTTTGGAGAAGATAAGGAATAGTAAAATTTTGGTGCCTCTTTTGATTGATCTTTTGAGGTTTGGGTCAGCCAAAGGGAAGGAGAATTCGATAACACTTTTGTTGGGATTGTGTAAGGAAGAAGGTGAAGTGGTGGCAAGGAGACTATTGGCAAATCCACGAAGCATTCCTTCTCTTCAATGCTTAGCTGCTGACGGCTCTTTAAGAGCACGAAGGAAGGCCGATGCTTTGCTTAGACTGCTCAATAGATGCTGCTCTCAACCTCATCATTCTCTTTGA 2082 0.4361 MDESSLPATMIFSGFLPTGSLLDSLVHISNEVASMEKFPFVQLRNVSSMIRRVKLLSSLFEEIQETYSPLPPSSILCFTELFFVIRRVKHLIQDCQESSSLWSLIQLEFISNQFYVLVKEMGRALDILPLSLLNITADIREQVELLHKQAKGVELFIDPRELQRREQLLHVMAHNTLQNKKNKGIPEFGKVQQILSSIGLRTPSDYDREISKLETEVQNQAGTGGLIVMSNIHNLISLVTYSKSMIFRDGENEIDEDCKPAVSAFTYKSSDNSFSSPSSQMTLSAPNVPDEFRCPISLDLMRDPVIVSSGHTYGRISIAQWINSGHHTCPKSGQRLIHTALIPNYALKSLVQQWCDENNVPLNEPTSSSSSSSEDPNRKDNSNENTVDHISAKKAAIDAVKMTAEFLVGKLATGSAEIQRQAAYELRLLAKTGMNNRRIIAEAGAIPFLVTLLGSHDPRIQEHAVTALFNLSIFDNNKVLIVAAGAVDHIVQVLESGKTMEARENAAAAIFSLTMIDDCKVEIGARPRAIPALVGLLREGTPIGKRDAATAIFNLAVYNPNKAKIVNAGAVSLLIELLMDDKAGITDDSLAVLALLLGCSEGLEKIRNSKILVPLLIDLLRFGSAKGKENSITLLLGLCKEEGEVVARRLLANPRSIPSLQCLAADGSLRARRKADALLRLLNRCCSQPHHSL 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0069 693 Pfam Armadillo/beta-catenin-like repeat 436 472 IPR000225 GO:0005515
Lele01g0069 693 Gene3D - 518 686 IPR011989 -
Lele01g0069 693 SMART Ubox_2 291 354 IPR003613 GO:0004842|GO:0016567
Lele01g0069 693 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 362 IPR013083 -
Lele01g0069 693 SUPERFAMILY RING/U-box 278 362 - -
Lele01g0069 693 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 444 486 IPR000225 GO:0005515
Lele01g0069 693 Gene3D - 385 517 IPR011989 -
Lele01g0069 693 PANTHER U BOX DOMAIN-CONTAINING 44 687 - -
Lele01g0069 693 MobiDBLite consensus disorder prediction 361 376 - -
Lele01g0069 693 FunFam RING-type E3 ubiquitin transferase 287 361 - -
Lele01g0069 693 SUPERFAMILY ARM repeat 404 682 IPR016024 -
Lele01g0069 693 MobiDBLite consensus disorder prediction 361 388 - -
Lele01g0069 693 CDD RING-Ubox_PUB 292 334 IPR045210 -
Lele01g0069 693 FunFam RING-type E3 ubiquitin transferase 499 686 - -
Lele01g0069 693 SMART arm_5 558 598 IPR000225 GO:0005515
Lele01g0069 693 SMART arm_5 433 473 IPR000225 GO:0005515
Lele01g0069 693 SMART arm_5 599 640 IPR000225 GO:0005515
Lele01g0069 693 SMART arm_5 517 557 IPR000225 GO:0005515
Lele01g0069 693 SMART arm_5 388 431 IPR000225 GO:0005515
Lele01g0069 693 SMART arm_5 474 515 IPR000225 GO:0005515
Lele01g0069 693 ProSiteProfiles U-box domain profile. 287 361 IPR003613 GO:0004842|GO:0016567
Lele01g0069 693 Pfam U-box domain 288 358 IPR003613 GO:0004842|GO:0016567
Lele01g0069 693 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 528 570 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0069 Lele-ChrLele01 449219 451300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0069 19 688 U-box Gene Family AT3G46510 38.039 1.16e-125 386