Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0056 ATGGCTGTCTCCGACGTCGGAGCTGTCCTAGAATTCTTGAGGAACAATGGCTTCACAGAGGCTGAGTCCGCCCTCAAAGAGGACGTCATCGAGAAGGGTGATACGGGGTCGTTCGACTACGAGAAATTCTTCTTCCCGATGGCGCCTCCACCTCCGCCGGTCAGAGTCGGATCGTTTTCCCGATGCTCGGAAAGGCACTGTGGCGGAGATTGCTCGAAGTCAAGCTATAAGTCGTCGGACGATGAGTTTGTGAGCTTGGGCTCATCTACTTCTGGCGTTTGTTCTTCGGAATTCATCAATCCGTATGGAATTCGCTACTCATCCCAAACCCAGAAAGATTCTGAATCTTCGTCAGATAGATTATCTCAATTTGGCACAGCACGTGACTACCACGACTTTGACATGCAAAATGAACCGTATTGGTATGATGAGCAAGATGATGACGATTTCATGACCCCCAGTTTTGAGGGGCCAGAGTTCTTTGGCTGTCAAAGTGAGGATAAGTTCATCATGACATCAGAAATGGAGAATCAACACGAAAATCTTCCAGAAAATAATCACAAAACTGAAGTATTCCAAGTGGAGGGAAATGGGGATTGCATGGACAAACTGTGCCTTCATAATCATTCAGATGTAGGGAATGAATATGTGACTTGTTTAAAAGACTTTTGTCACATTGATAAGAAAGAGCAGCTTGAAGGAGGATTAGTTGGAGAGGTTGAGAATCCTACTTTTGTCTATAATTGTGAAGTTCCATTGATCAAACGCTCTGCAGGTTTAGGAGGGTCTTGTAGTGGAGATCCTAGTAACGAACACTACCCAAGTTTAAAAGAAATTCATCTGAATGATTTGCATTTAAAGGTTGTTGGGGATAGTTCCTCCACTGATTCTGCTCCAGAGCATTCTATGAGCCAAACTTTTGACCTCTATCCTAACAGTAACGGCAATAACTGTTTCAAAGCTCCCTATGACTTAACTATCGAAGCTGCTGAAAAAGACCTGCCAAATGGACTCGCCAGCTATAAAGCTCAAGATTGTGGGGAATTCACTGAAGAATGCCAAGACCCAGAAAATGCAGCAGATGCTACTGATGATGAGCTTTTAAAGTACACTCACGAGGATGAATATGAAGTATTTGACTTGAGAATTATACATAGAAAGAACAGGACTGGGTTTGAAGAAAGCAAAGATCTGCCCATTGTGCTAAATGCAGTCGTAGGCGGGAGGTACTATGTAACAGAATATCTTGGTTCGGCTGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGATGTCTGCTTGAAGATTATAAAAAACGACAAAGACTTCTTTGACCAAAGCTTAGATGAAATTAAACTTCTAAAGCTTGTCAATAAGAATGACCCAGCTGATGAACGCCACATATTGCGACTTTATGATTACTTCTATCATCAGGAGCATCTATTCATTGTTACTGAGCTTCTGCGAGCAAACCTATATGAATTTCAGAAATACAATCAAGAGTCTGGTGGTGAAGCATATTTTACATTGAACAGGTTGCAGCTCATTACTCGTCAATGTTTGGAGGCCTTGCAATACTTGCATAGCTTGGGAATAATTCACAGTGACCTGAAGCCGGAAAATATTCTTATTAAAAGTTATAAAAGATGTGAGATTAAAGTTATTGATCTAGGAAGCAGTTGCTTTCAATCAGACAATCTATGCCTATACGTACAGTCGCGATCCTATCGGGCCCCTGAAGTGATGCTAGGCCTCCAATATGATGAGAAGATTGACATGTGGTCTCTTGGCTGTATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGAAGCTGTTGCAATTATTCTTGCGCGCATGGTTGGAATGCTTGGTCCTATTGATCTGGAGATGTTAGTTAAGGGGCAGGAAACACACAAATATTTCACAAAAGAATATGATATTTACCATGTAAATGAGGAGACAGACCAATTGGAGTACATAATTCCAGAGGAGTGGTCGTTGGAGCAGCAGCTGCAGGTTTCTGATGCGATGTTTATTGACTTTGTCAGATTCTTGCTTAGCACCAATCCCAGAAGGCGACCAACTGCAAGACAGGCACTCAAGCATCCATGGCTTTGCCATGTTTATGACTCCCAAACAATATGCCCTTTGATTTTGCCTTCAGTATGGGGAGACTGA 2199 0.4256 MAVSDVGAVLEFLRNNGFTEAESALKEDVIEKGDTGSFDYEKFFFPMAPPPPPVRVGSFSRCSERHCGGDCSKSSYKSSDDEFVSLGSSTSGVCSSEFINPYGIRYSSQTQKDSESSSDRLSQFGTARDYHDFDMQNEPYWYDEQDDDDFMTPSFEGPEFFGCQSEDKFIMTSEMENQHENLPENNHKTEVFQVEGNGDCMDKLCLHNHSDVGNEYVTCLKDFCHIDKKEQLEGGLVGEVENPTFVYNCEVPLIKRSAGLGGSCSGDPSNEHYPSLKEIHLNDLHLKVVGDSSSTDSAPEHSMSQTFDLYPNSNGNNCFKAPYDLTIEAAEKDLPNGLASYKAQDCGEFTEECQDPENAADATDDELLKYTHEDEYEVFDLRIIHRKNRTGFEESKDLPIVLNAVVGGRYYVTEYLGSAAFSKVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADERHILRLYDYFYHQEHLFIVTELLRANLYEFQKYNQESGGEAYFTLNRLQLITRQCLEALQYLHSLGIIHSDLKPENILIKSYKRCEIKVIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDMWSLGCILAELCSGEVLFPNEAVAIILARMVGMLGPIDLEMLVKGQETHKYFTKEYDIYHVNEETDQLEYIIPEEWSLEQQLQVSDAMFIDFVRFLLSTNPRRRPTARQALKHPWLCHVYDSQTICPLILPSVWGD 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0056 732 PANTHER DUAL SPECIFICITY PROTEIN KINASE 109 712 - -
Lele01g0056 732 Gene3D Phosphorylase Kinase; domain 1 405 491 - -
Lele01g0056 732 Gene3D Transferase(Phosphotransferase) domain 1 464 712 - -
Lele01g0056 732 ProSiteProfiles Protein kinase domain profile. 410 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0056 732 SUPERFAMILY Protein kinase-like (PK-like) 400 728 IPR011009 -
Lele01g0056 732 Pfam Protein kinase domain 412 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0056 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Lele01g0056 732 SMART serkin_6 410 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0056 732 FunFam Putative serine/threonine-protein kinase dyrk2 404 491 - -
Lele01g0056 732 CDD PKc_DYRK_like 410 712 - -
Lele01g0056 732 FunFam Serine/threonine-protein kinase ppk15 489 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0056 Lele-ChrLele01 346657 350687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0056 407 707 MAP Kinase Gene Family AT5G19010 30.841 2.14e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lele01g0056 Pkinase 1.3e-51 CL0016