Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0045 ATGTCAGGCTTTTGTAGGAGTGGCAGCAGCGGTGGGAGTGGGACCAAGTGTGGGCGTTGGAATCCCACGGCGGAGCAGCTCAAGCTTCTGACTCATATCTTCGCGTCTGGTCTCCGAACCCCCAGCACCGACCAGATCCAAAAGATCTCCTCTCTCCTCAGCTTTTACGGCCACATCGAGAGCAAGAATGTCTTCTATTGGTTCCAGAACCATAAAGCCCGTGAACGCCTCAAACGCCGCAAACACAAATCTTCTTCTTCACCAAATAATTATCACGGGAACCAAGTGGCGCCGGAGCCGGAGAGAGTGATGGAGACGCTTCAACTCTTCCCCTTGGACTCGTTGGGCGAATCAGAAGCGGGGAAGCTGAGGCTGCATGCTTATTGCAGGGACGATCCTGCCGAACCAATGGAACCCCCTCCCTTGGATCTTCGCCTGAGCTTTCTCTAA 450 0.5422 MSGFCRSGSSGGSGTKCGRWNPTAEQLKLLTHIFASGLRTPSTDQIQKISSLLSFYGHIESKNVFYWFQNHKARERLKRRKHKSSSSPNNYHGNQVAPEPERVMETLQLFPLDSLGESEAGKLRLHAYCRDDPAEPMEPPPLDLRLSFL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0045 149 MobiDBLite consensus disorder prediction 77 100 - -
Lele01g0045 149 Pfam Homeodomain 17 76 IPR001356 GO:0003677
Lele01g0045 149 Gene3D - 16 85 - -
Lele01g0045 149 SMART HOX_1 15 82 IPR001356 GO:0003677
Lele01g0045 149 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 8 89 IPR044555 GO:0003700|GO:0099402
Lele01g0045 149 FunFam WUSCHEL-related homeobox 11 16 84 - -
Lele01g0045 149 ProSiteProfiles 'Homeobox' domain profile. 13 78 IPR001356 GO:0003677
Lele01g0045 149 SUPERFAMILY Homeodomain-like 18 77 IPR009057 -
Lele01g0045 149 CDD homeodomain 19 76 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0045 Lele-ChrLele01 283126 283649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0045 6 149 Wox Gene Family AT3G11260 52.326 4.18e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele01g0045 Homeodomain 1.5e-16 CL0123