Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0030 ATGACTGAGGGAGACCGTGCCGGCTCTGCCTCTCCCTCTCCCTCCCTCGAACCTCCCCACAATGGCGCCGCCGACTCCGAAGTCGTCGGTTCTTCCGACTTGGGACCCGTCGCAGGCGATGCTGACTGCCTTGGAGACGGAAACGTTTTTGGTAGAGTGAAGGGACCGTGGTCCCCGGAGGAAGATGCCGTTCTCAGTCGATTGGTTAGCGAGTTGGGGGCAAGGAATTGGAGCATGATAGCGCGAGCGATACCCGGTCGCTCCGGCAAGTCGTGCCGCCTCCGTTGGTGTAATCAACTTGACCCCTGTGTTAAACGCAAGCCCTTTACTGAAGAAGAAGATCGTATTATAGTTGCAGCCCATGCAATGCATGGAAACAAATGGGCAGCAATCGCTAGGCTTCTTCCAGGAAGAACAGATAATGCTATAAAAAATCACTGGAATTCTACACTTAAGCGCAGGTCCTTGGATCTTGGAAGATACATACCAATGGGTGCTGGCATGGGGGAAGAGGGCAGCCTTGAGGCCACTGACAAAATAAAGGAATCTTCCGAATCAGCAGGGGATATCAATTCATTGAATCCCACACAAATTAAGAATGTTGGGATGGATGGTGGTATTAATCACCATGAAGATAATCCTCCAAGAAACAATGGTGCTGAAGTGGAGGAACAGCCTACCGTGTGTCAACCTGTAGCACGTGTTAGTGCATTTAGAGTCTATACTCCTCCAAGCAGGCCAACAACTGGATCCGCATATTCAAGGATGCTCCCGATGCAGGGTCCTTTGATTCAATCGTCCAAAGTTGAAGTAGGAGCCTGCAAGCTATTTGAAGAAGTTGAGTGTGAGCCCATGGTTCCGGTGCAATGTGGTCATGGCTGCTGTTCTGCAAGTTCTCGTAAAAACCATGCTCATGATTCGCTACTAGGTCCGGAGTTCATCGACTATTTGGAGCCGCCCTCCATTTCAAGTCATGAATTGATCTCTATAGCAACAGATTTGAACAATATTGCTTGGATCAAGAGCGGCCTAGACGCCAGAGAAACCGAGAATGCGGCAAACTTGACGGCATCTCAAGGTGTTGCTACTGCATTTCAAAATGGCTTCTTTGAGGACGGAGCGAGCAAGTTTGTGGGTGTGATGCAAGATATGCCATCAACGCAGATATCCAGCCATCCATTTGCAATGCCTGCAGAGGTTTGA 1203 0.4979 MTEGDRAGSASPSPSLEPPHNGAADSEVVGSSDLGPVAGDADCLGDGNVFGRVKGPWSPEEDAVLSRLVSELGARNWSMIARAIPGRSGKSCRLRWCNQLDPCVKRKPFTEEEDRIIVAAHAMHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRSLDLGRYIPMGAGMGEEGSLEATDKIKESSESAGDINSLNPTQIKNVGMDGGINHHEDNPPRNNGAEVEEQPTVCQPVARVSAFRVYTPPSRPTTGSAYSRMLPMQGPLIQSSKVEVGACKLFEEVECEPMVPVQCGHGCCSASSRKNHAHDSLLGPEFIDYLEPPSISSHELISIATDLNNIAWIKSGLDARETENAANLTASQGVATAFQNGFFEDGASKFVGVMQDMPSTQISSHPFAMPAEV 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0030 400 MobiDBLite consensus disorder prediction 1 40 - -
Lele01g0030 400 SMART sant 53 102 IPR001005 -
Lele01g0030 400 SMART sant 105 153 IPR001005 -
Lele01g0030 400 SUPERFAMILY Homeodomain-like 51 147 IPR009057 -
Lele01g0030 400 CDD SANT 108 151 IPR001005 -
Lele01g0030 400 Pfam Myb-like DNA-binding domain 54 100 IPR001005 -
Lele01g0030 400 Pfam Myb-like DNA-binding domain 106 150 IPR001005 -
Lele01g0030 400 ProSiteProfiles Myb-like domain profile. 101 151 IPR001005 -
Lele01g0030 400 PANTHER MYB PROTEIN-RELATED 54 210 - -
Lele01g0030 400 FunFam Transcription factor MYB44 108 154 - -
Lele01g0030 400 Gene3D - 108 154 - -
Lele01g0030 400 FunFam MYB transcription factor 54 105 - -
Lele01g0030 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 155 IPR017930 -
Lele01g0030 400 ProSiteProfiles Myb-like domain profile. 54 100 IPR001005 -
Lele01g0030 400 CDD SANT 56 98 IPR001005 -
Lele01g0030 400 Gene3D - 53 105 - -
Lele01g0030 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 100 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0030 Lele-ChrLele01 203717 207854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0030 49 381 MYB Transcription Factor Family AT3G55730 48.703 2.00e-104 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele01g0030 Myb_DNA-binding 3.4e-14 CL0123