Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0023 ATGACCACACAAGGGCAGGTCGGGATTGACCATGCTGTGCTCGATGATATAATCAGACGGCTCACAGAAGTCCGATTAGCGAGACCCGGAAAACAGGTTCAGCTCTCTGAGGCCGAGATCAGGCAGCTGTGTATTGCTTCTAAAGATATCTTTGTCCGGCAGCCCAATTTGCTTGAACTCGAGGCCCCCATCAAGATTTGTGGTGATATTCATGGACAGTACAGTGATTTATTAAGGCTTTTTGAGTATGGAGGTTTTCCGCCTAGCTCTAACTACCTATTTTTAGGAGACTATGTGGATCGTGGGAAGCAGAGCTTAGAAACCATATGCCTTTTACTTGCCTATAAAATCAAATATCCGGAGAACTTTTTCCTTTTAAGAGGAAATCATGAATGTGCTTCCATTAATAGGATATATGGGTTTTATGATGAATGTAAGCGACGGTTCAATGTGAGGCTTTGGAAATCCTTTACAGACTGTTTTAACTGCCTTCCTGTGGCAGCCCTTATAGATGACAAAATATTGTGCATGCATGGTGGCCTTTCCCCAGACCTTACAAGCTTGGATCAAATTAGAAATCTATCCCGTCCAACTGCTGTTCCAGATACAGGATTGCTCTGTGATTTGCTTTGGTCAGATCCTGGTAGAGACGTGAAAGGATGGGGTATGAATGACAGAGGTGTTTCATACACCTTTGGCCCAGATAAGGTAGCTGAATTCTTGACAAAGCATGACTTGGACCTGATCTGTCGTGCGCATCAGGTTGTTGAGGATGGGTATGAATTCTTTGCCGACAGGCAACTTGTTACAATTTTTTCAGCTCCTAACTACTGTGGTGAATTTGACAATGCTGGTGCCATGATGAGCGTGGATGAAAACTTGATGTGCTCTTTCCAGATTCTTAAGCCTGCAGAGAAGAAAGCAAAGTTCATGATGTCCAACAAAATGCCAGAATGCTTTTATACAGACCGAGTTATTGTTAAAGCGTATTTACTCTGTAACGTTTCTCAATGTGGTGTGAGATTTCATCACCTATATGTTGGGGAAAGGTCAGATTCACCTGTAGATGGCCTGATCTCAATTAGAATCGAGCACCTTTTTTCTTCGCAATCATCGAATTATTTAATCGACTTCGTTGTGTTTTGTGCCTCAGCTCAAGTCAACATTTTGATTTTCCGCTTAGCTCATAGCCTTTTCTTTTTCCCTGCACTTGCCAAAGGTGGCAACGACTCCTTAAAATCTCCGTATGAAAAAGCATTGGATGCATTGTCGTCTTTAATCACCAGACGCACTCGTGCTGATACTAGTAACATGGGGGATCGGTTCAGCGTGCTATTCGAGTACTTAAAGATGCTAGATTTGGAGGAGTCAATTTCAAAGATGAAGATCATACATGTTGCCGGTACCAAAGGGAAGGGATCTACATGCACGTTCACAGAATCTATATTACGTAACTGTGGTTTTCGGACCGGACTCTTTACATCTCCTCACCTCATAGATGTTCGTGAAAGATTTCGTTTAGACGGTGTGGAAATATGTGAAGATAAATTTTTAGCATATTTCTGGTGGTGTTATGATAGACTAAAGGAAAAAACTGATGAAAATGTTCCAATGCCTCCCTATTTTCGCTTCCTTGCTTTGCTTGCCTTCAAGATATTTGCAGAAGAGCAGGTAGATGTTGCTATAATGGAGGTTGGATTAGGTGGTAAATATGATGCAACAAATGTGGTTCAAAAACCTATTGTGTGTGGCATAACTTCCCTTGGATATGACCACATGGAGATTCTTGGGAATACTCTTGGAGAAATTGCTGGTGAGAAGGCTGGTATCTTCAAGGACTGGGTTCCAGCTTTTACTGTGCCTCAGCCTGATGAAGCCATGCATGTACTTGAAGAGAAAGCATCACAACTTAATGTACCTCTTCGAGTAGCACAGCCTTTAGATGCCAAGTTGTTAAATGGTTTAAGACTTGGGCTTGAAGGTGAGCATCAATATTTAAATGCAGGTCTTGCCGTTTTACTATGCTCTACATGGCTGAAGAGGACTGGACATCTTGAAGATAGCTACTTGGAACAGACTCACTCGTTGCCAGAGCAGTTTGTAAAAGGATTAACGACTGCAAGTTTACAAGGAAGGGCTCAAATTGTTCCTGATCAACACATCAACATTGAAAGCCAAAATGAACTTGTCTTCTTTCTAGATGGGGCGCATAGTCCTGAAAGCTTAGAAGCATGTGCGAGGTGGTTTTCATCTTCTGTTAAAGAAGACAACCTGGACCAGACCTTGTTTCATCAGAAGCCTGATAATTCTAAAATTTCTAATGAATTAATGAGTTTGCATTCTGGTGAAAGAACCAAGAGACAGTCGACACAGATATTATTGTTCAATTGCCTGGCAGTAAGAGATCCTCAGTTGCTCCTTCCTCGCCTGATGCAAACATGTGCTGATAATGGTGTGTACTTCAAGAAGGCGCTTTTTGTACCAAGTTTATCAGTGTATTACAAAGTTGGATCCCATTCGTTAACACCAGCTGAATCTAATGTTGACCTATCGTGGCAGTCCACTCTTCAGAAAGTGTGGGAAAATCTCATGCAAGGAAACAAAGGAAGTGATGCCAAGAGTACATATGCTGTTTCTGATGAATTAAAAGAGGGTATGGAAATGAGTACCAGTAATTGTGAACATAGTGCAGTGTTTCCCTCATTGCCGTTGGCTATCAAATGGCTCAGGGACAGAGTGCAGCAAAATCAGTCTGTTCGTTTTCAGGTTCTGGTGACCGGTTCTTTACACCTTGTTGGCGATGTCTTGAAATTAGTCAAGAAGTGA 2826 0.42 MTTQGQVGIDHAVLDDIIRRLTEVRLARPGKQVQLSEAEIRQLCIASKDIFVRQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPSSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKSFTDCFNCLPVAALIDDKILCMHGGLSPDLTSLDQIRNLSRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLTKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKAKFMMSNKMPECFYTDRVIVKAYLLCNVSQCGVRFHHLYVGERSDSPVDGLISIRIEHLFSSQSSNYLIDFVVFCASAQVNILIFRLAHSLFFFPALAKGGNDSLKSPYEKALDALSSLITRRTRADTSNMGDRFSVLFEYLKMLDLEESISKMKIIHVAGTKGKGSTCTFTESILRNCGFRTGLFTSPHLIDVRERFRLDGVEICEDKFLAYFWWCYDRLKEKTDENVPMPPYFRFLALLAFKIFAEEQVDVAIMEVGLGGKYDATNVVQKPIVCGITSLGYDHMEILGNTLGEIAGEKAGIFKDWVPAFTVPQPDEAMHVLEEKASQLNVPLRVAQPLDAKLLNGLRLGLEGEHQYLNAGLAVLLCSTWLKRTGHLEDSYLEQTHSLPEQFVKGLTTASLQGRAQIVPDQHINIESQNELVFFLDGAHSPESLEACARWFSSSVKEDNLDQTLFHQKPDNSKISNELMSLHSGERTKRQSTQILLFNCLAVRDPQLLLPRLMQTCADNGVYFKKALFVPSLSVYYKVGSHSLTPAESNVDLSWQSTLQKVWENLMQGNKGSDAKSTYAVSDELKEGMEMSTSNCEHSAVFPSLPLAIKWLRDRVQQNQSVRFQVLVTGSLHLVGDVLKLVKK 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0023 941 SUPERFAMILY Metallo-dependent phosphatases 24 312 IPR029052 -
Lele01g0023 941 CDD MPP_PP1_PPKL 13 303 - -
Lele01g0023 941 Pfam Mur ligase middle domain 466 625 IPR013221 GO:0005524|GO:0009058|GO:0016881
Lele01g0023 941 Gene3D - 711 941 IPR036615 GO:0009058|GO:0016881
Lele01g0023 941 PANTHER FOLYLPOLYGLUTAMATE SYNTHASE-RELATED 411 939 IPR001645 GO:0004326|GO:0005524|GO:0009396
Lele01g0023 941 TIGRFAM folC: bifunctional protein FolC 454 755 IPR001645 GO:0004326|GO:0005524|GO:0009396
Lele01g0023 941 SMART pp2a_7 35 305 IPR006186 GO:0016787
Lele01g0023 941 SUPERFAMILY MurD-like peptide ligases, catalytic domain 442 678 IPR036565 GO:0005524|GO:0009058
Lele01g0023 941 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Lele01g0023 941 ProSitePatterns Folylpolyglutamate synthase signature 1. 464 487 IPR018109 GO:0004326|GO:0005524|GO:0009396
Lele01g0023 941 FunFam Folylpolyglutamate synthase 711 941 - -
Lele01g0023 941 FunFam Serine/threonine-protein phosphatase 61 314 - -
Lele01g0023 941 Gene3D - 408 693 IPR036565 GO:0005524|GO:0009058
Lele01g0023 941 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 710 940 IPR036615 GO:0009058|GO:0016881
Lele01g0023 941 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Lele01g0023 941 ProSitePatterns Folylpolyglutamate synthase signature 2. 562 577 IPR018109 GO:0004326|GO:0005524|GO:0009396
Lele01g0023 941 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Lele01g0023 941 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Lele01g0023 941 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Lele01g0023 941 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Lele01g0023 941 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Lele01g0023 941 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Lele01g0023 941 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Lele01g0023 941 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Lele01g0023 941 FunFam Folylpolyglutamate synthase 413 689 - -
Lele01g0023 941 Gene3D - 6 314 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0023 Lele-ChrLele01 163417 174184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0023 64 248 Calmodulin-binding Proteins AT5G63870 33.032 6.21e-27 110