Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0004 ATGATCTGGGAGCTCGGCTTTGCCTGCGTTGTCCTGACTCGCCGCCGGCCAAGCTCCGGTAAAAACGACGGCGTCGGATATACAAAGACGTGGTTGCTTGCGGAGTCTGGTGGGTGTGGAGCCGAGGTGACGAATGCTGACCCACAATCTGTTCACTCATCTTTCCGTTTCAGTTTCTGTTCTCAGTTTCAGCTCGAATCCTCGAGCATGAATTCTTCCGCTGCTGCAACCGTTCTGGTGGTTAATCTGGACGATGGAATGCATAATTCTCGAGCTCGAGAGCTGAAATATCGGAGGATGGAGTCCTTGGAAAAAAGCATATCCCCTGTAGCCAACATTTTGATCAGGTTCAACTACGGTGAAATTCTATCTGCTACTCTCAATTTCTCCAAAGGTAAAGTTGGTCGGTTGTTCTTGTTTAACTCGAATATTATTCCAGGCAGAGTATCAGGCGGAGGGACCTTGAGCTGTGTATTTAGGGGTAGAGTTGGGCTTTTGAGGACTGCTGTAGCAATCAAACGATTGGACAAGGAAGACAAGGAATCTGCAAAGGCTTTCTGGAAAGAACTGAGGATTGCCAGTTCTCTTCATAACCCAAACATTGTTCCCCTTGGGGGTTTTTGTATTGACCCGGAGGAGGGTTTATTTCTGGTGTACAAATATGTATCCGGGGGCAGCCTGGAGCATCATTTGCATGAAGCCGTGGCTTATCTGCGTAACGGAACTGAAAGACGCGTTGTTCACAGAGACATTAAACCCTCAAACATTCTCCTTTTCTCTAAAAAGACTCCCAAGGCTAAACCCTTGCTACAGAAAGGGAATGGATCCATTGAAGAGTTGCTGGATCCTCTACTCAAGTGCAGCTTGAGATTCTCAAATCAGATGGCTCAGATGATAGAAGCAGCAGCTGTTTGTGTTACAAATGAAGAATATTGGAGACCTGGAATACAAGAGATTATTGCAATACTGAGAGGTCAAGAAGAACGTGTCTTGCCTAAAAGGAAGAAGTCTGGTCTTCTTGGGAATGGATTGGTAGTTGATTGCTACCTTCAATTACAGAAAAACAAATAA 1071 0.4566 MIWELGFACVVLTRRRPSSGKNDGVGYTKTWLLAESGGCGAEVTNADPQSVHSSFRFSFCSQFQLESSSMNSSAAATVLVVNLDDGMHNSRARELKYRRMESLEKSISPVANILIRFNYGEILSATLNFSKGKVGRLFLFNSNIIPGRVSGGGTLSCVFRGRVGLLRTAVAIKRLDKEDKESAKAFWKELRIASSLHNPNIVPLGGFCIDPEEGLFLVYKYVSGGSLEHHLHEAVAYLRNGTERRVVHRDIKPSNILLFSKKTPKAKPLLQKGNGSIEELLDPLLKCSLRFSNQMAQMIEAAAVCVTNEEYWRPGIQEIIAILRGQEERVLPKRKKSGLLGNGLVVDCYLQLQKNK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0004 356 SUPERFAMILY Protein kinase-like (PK-like) 137 265 IPR011009 -
Lele01g0004 356 Gene3D Transferase(Phosphotransferase) domain 1 217 302 - -
Lele01g0004 356 PANTHER OS01G0253100 PROTEIN 266 329 IPR045271 -
Lele01g0004 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Lele01g0004 356 Gene3D Phosphorylase Kinase; domain 1 114 216 - -
Lele01g0004 356 ProSiteProfiles Protein kinase domain profile. 144 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0004 356 SMART serkin_6 144 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g0004 356 Pfam Protein kinase domain 151 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0004 Lele-ChrLele01 19564 21933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0004 117 258 Receptor kinase-like Gene Family AT5G48740 31.707 2.74e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele01g0004 Pkinase 7.7e-13 CL0016