Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02520 ATGGACGCCTCAAAGGAAAACCTTGTGCCTCCGCTTCCGCTCCTGCCCTCTTCAGATCTTCAAGGCTGTCCAAGAATGGAGCAGAGCCTGAAGCCCCTCCATCACCGGTTGCCTCTCCGCAGCATCAATCAGAATCTTATGCCCGACAAAAGCCCTGTTCAATCCCGCAAGAGTAAAGCACACACGGTTCGGCACCACCACCCCCCTCAGCCTGAAGCAACTAAGAAACAGAACCTGTTGGCCCCCAACCCGAGTTACAACTTAGATTGTGAAATCGTAGATATTGATGACGATGACGACGATGGCAGTGACAATGCAGTTCCAGTATTCGTCAAACATACTGAAGCCATGCTCGACGAAATAGACAGGATAGAGGAGATTGAAATGGAAGATGTCCAGGAACCTGTTTTGGACATCGACGCCTGTGATAAGAAAGATCCACTTGCAGTTGTTGAGTACATAGATGATATCTACAGGATCTACAAGAAAATTGAGAATTCGAGCTGTGTCTCTCCAAATTACATGACTAGTCAATTTGACATTAATGAGAGGATGAGGGCCATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACATTGTTCCTTACTGTCAATCTTATAGACAGGTTCTTGGAGCGTCAGGCCATGATCAGAAAGAAACTTCAGTTAGTCGGTGTAACAGCTATGCTAATAGCTTGTAAGTACGAGGAGGTCTCAGTCCCTACCGTTGAGGATTTTATTCTGATAACAGACAAGGCATATACAAGAGATGAAGTTTTAGATATGGAGAAATTGATGATGAACATCTTGCAATTCAAGTTGTCCGTGCCTACTCCATACATGTTCATGAGAAGATTTCTTAAGGCAGCTCATTCTGATAAAAAACTGGAGCTCATGTCCTTCTTCTTGGTTGAACTTTGCTTGGTGGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTAGCTGCTGCAGCCATATACACAGCTCAGTGTAGCATGTACCAGTTTAAGCAATGGACTAAGACCAGCGAGTGGTATACTGATTACTCAGAAGAGCAGCTTCTAGAATGCTCAAGGCTGATGGTTGCTTTCCATCGGAAAGCTGGATCAGGGAAACTCACTGGTGTATATAAAAAGTACAGTACATGGAAGTATGGCTGTGCCGCAAAAATAGAACCAGCTCTGTTTTTACTGGATAATTAA 1224 0.4387 MDASKENLVPPLPLLPSSDLQGCPRMEQSLKPLHHRLPLRSINQNLMPDKSPVQSRKSKAHTVRHHHPPQPEATKKQNLLAPNPSYNLDCEIVDIDDDDDDGSDNAVPVFVKHTEAMLDEIDRIEEIEMEDVQEPVLDIDACDKKDPLAVVEYIDDIYRIYKKIENSSCVSPNYMTSQFDINERMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQAMIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRDEVLDMEKLMMNILQFKLSVPTPYMFMRRFLKAAHSDKKLELMSFFLVELCLVECKMLKFSPSLLAAAAIYTAQCSMYQFKQWTKTSEWYTDYSEEQLLECSRLMVAFHRKAGSGKLTGVYKKYSTWKYGCAAKIEPALFLLDN* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02520 407 ProSitePatterns Cyclins signature. 186 217 IPR006671 -
Lapu9g02520 407 SUPERFAMILY Cyclin-like 145 281 IPR036915 -
Lapu9g02520 407 MobiDBLite consensus disorder prediction 1 81 - -
Lapu9g02520 407 Gene3D - 156 397 - -
Lapu9g02520 407 CDD CYCLIN_AtCycB-like_rpt1 134 279 - -
Lapu9g02520 407 FunFam G2/mitotic-specific cyclin-1 268 396 - -
Lapu9g02520 407 Pfam Cyclin, C-terminal domain 284 400 IPR004367 -
Lapu9g02520 407 PANTHER CYCLINS 101 389 IPR039361 -
Lapu9g02520 407 SMART Cyclin_C_2 284 401 IPR004367 -
Lapu9g02520 407 Gene3D - 170 282 - -
Lapu9g02520 407 PIRSF Cyclin_A_B_D_E 19 407 IPR046965 GO:0016538|GO:0044772
Lapu9g02520 407 CDD CYCLIN_AtCycB-like_rpt2 284 400 - -
Lapu9g02520 407 SUPERFAMILY Cyclin-like 283 400 IPR036915 -
Lapu9g02520 407 Pfam Cyclin, N-terminal domain 156 282 IPR006671 -
Lapu9g02520 407 SMART cyclin_7 288 370 IPR013763 -
Lapu9g02520 407 SMART cyclin_7 191 275 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02520 Lapu-Chr9 39429532 39432717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02520 12 405 Core Cell Cycle Gene Families AT1G20610 54.953 6.09e-159 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02520 K21777 - gmx:100812029 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02520 9 39429532 39432717 Lapu9g02520 9 39429532 39432717 ECH