Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02487 ATGGGAAGGTCCCCTTGTTGTGAGAAAGCACACACAAACAAAGGTGCATGGACCAAAGAAGAAGACGATCGCCTCATAGCTTACATTAGAGCTCACGGTGAAGGCTGCTGGCGCTCTCTCCCCAAAGCCGCCGGCCTTCTCCGCTGCGGCAAGAGCTGCCGTCTCCGCTGGATCAACTACCTCCGCCCTGACCTCAAACGCGGCAATTTCACCGAAGAAGAAGATGAGCTCATCATCAAACTCCACAGCCTCCTCGGCAACAAGTGGTCTCTCATAGCTGGAAGATTGCCGGGGAGAACAGACAATGAGATAAAGAATTACTGGAACACTCACATAAGAAGGAAGCTTTTGAGCAGAGGAATTGACCCTGCAACTCACAGGCCTCTCAACGACTCTCCTCGTCACAATCAAGTTCAAGAATCAGGCGGCGCAGCCACCATATCTTTTGCTCCTAAACAAGAGGAAAAGGACAACGTGTTTGTGGAGGTTAAGGATGCCAAAAGTCCCACATCGGATCGCTGCCCTGACTTGAACCTTGAGCTGAGCATTAGTCCTCCCCATCATCACCGTCACCAGGAAGAGGGTGACGATGATGAGGAGGAGTCGAAGAGTATGGAGAGAAGCCTTTGCTTTGCCTGCAGTTTGGGTTTGCAAAACAGCAAAGAATGCAGCTGTGCCCTCAATGCCAACACCGGTAATGCCAACGCTGCTGCTGCTGCTGCTGCCACTAGCTATGATTTCTTGGGCTTGAAAACCAACCCTTTGGACTACAGAAGCTTGGAAATGAAATGA 792 0.5101 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNDSPRHNQVQESGGAATISFAPKQEEKDNVFVEVKDAKSPTSDRCPDLNLELSISPPHHHRHQEEGDDDEEESKSMERSLCFACSLGLQNSKECSCALNANTGNANAAAAAAATSYDFLGLKTNPLDYRSLEMK* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02487 263 FunFam MYB-related transcription factor 13 66 - -
Lapu9g02487 263 CDD SANT 69 112 IPR001005 -
Lapu9g02487 263 SMART sant 66 114 IPR001005 -
Lapu9g02487 263 SMART sant 13 63 IPR001005 -
Lapu9g02487 263 CDD SANT 16 61 IPR001005 -
Lapu9g02487 263 MobiDBLite consensus disorder prediction 183 203 - -
Lapu9g02487 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lapu9g02487 263 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lapu9g02487 263 FunFam Myb transcription factor 68 137 - -
Lapu9g02487 263 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lapu9g02487 263 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 202 - -
Lapu9g02487 263 MobiDBLite consensus disorder prediction 122 142 - -
Lapu9g02487 263 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lapu9g02487 263 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lapu9g02487 263 Gene3D - 68 141 - -
Lapu9g02487 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lapu9g02487 263 Gene3D - 14 66 - -
Lapu9g02487 263 MobiDBLite consensus disorder prediction 164 203 - -
Lapu9g02487 263 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02487 Lapu-Chr9 39150026 39150901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02487 1 263 MYB Transcription Factor Family AT4G38620 57.192 3.72e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu9g02487 Myb_DNA-binding 3.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02487 K09422 - tcc:18607558 367.466