Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02475 TGGAAAAGGATGAAGGGTGAAGATGATATAGGGCGCTGGGTGTTAGAGTTCCTTCTTCGGTGCAGTAACAATAAGGATTACCTGATCAAAAATGTGTTTCGCAGAATTCCTGTTTCTGACGATAATTCCCGCCTCAAGAAGACCCTTCTCCTCAAAACTCTTCAAGACCACTTCTCCTCTCTATCCATTACCGAATCCCTTCTCAAAACCCTTGAGCTTCTCGAGGAAATTCTTCGCCGCGACGCCTCTCCGGTCACCGCCACCATGAGTGCCGCCTACTGCGCCGTTGCGGTGGAGTGCACGCTCAAGTACCTGCAAGTGAATCTCCACCACCACAACCCTGCCTACCTCCGCGCCGTGAACAGGATATGGCGAGCGAGGGTTCCGCATATGAACGGTTCCGGTTCCGGCGAGGGAAGCCTTCTTCTCTCGGCGGAGTTGGAGCGGTGGAGAAGCGACATCGAAGCTTCCCTTTCGGACTCTCAAGTGAGGGAGAGGTTGGCCTCCATCGATGTCAGAAGGGATGCCATCATGAAGCTCAAGGCTTTTTTGGCCGAAGCCTGGGCCGATTTGGGCCCTCCCTTTCTTCAGTTAGCGGCGTCGATGCACGCGAACAAGGCCCATCAACACCAAGAGGGAGAAATTCGGAAGTGTAGCAGTGATGCTGCTGAGAATGTGCATTTAACAACAACTATTGAAGTCGAAAAGGTTGGGGATTGCAGTTCTGGAGAGTTGGCTAAGGAGGCACCTATTGAAAAGCAGAGTAGAGAGGCAGATGTATCTTGCTCACATGGCATTAATAATGATGGTGCTGATACGTTGGAAAAGGATCAAACTTCTGTCCCTCAGAATTGTGACCGAAGGCCTAGTTTGATGGAAAAAAATAGTACCGCTCGTATTTATGAGTGGGATGATTCGATAGACGGCTTGGAGGGTGGAACATCAAACTATGCAAGTAAATTTAGTTTGCCTACTCCGAAGAGGAGAACACTTTCTCCATTGAAGATGTATAAACCAACAAGCATTACAAAGAGGAGAAAAGCAAAAAAGTGGAGTCGGTTAGAAGAGGAGACGCTTAAGGCTGGTGTAGACAAGTTTGGTAGGGGAAATTGGAAGTTAATCCTAAATTCTCACAAAGATATATTTGATGAGAGAACTGAAGTTGATTTGAAGGACAAGTGGAGAAATATGACGCGGTATGGGTGCAAATGA 1212 0.4802 WKRMKGEDDIGRWVLEFLLRCSNNKDYLIKNVFRRIPVSDDNSRLKKTLLLKTLQDHFSSLSITESLLKTLELLEEILRRDASPVTATMSAAYCAVAVECTLKYLQVNLHHHNPAYLRAVNRIWRARVPHMNGSGSGEGSLLLSAELERWRSDIEASLSDSQVRERLASIDVRRDAIMKLKAFLAEAWADLGPPFLQLAASMHANKAHQHQEGEIRKCSSDAAENVHLTTTIEVEKVGDCSSGELAKEAPIEKQSREADVSCSHGINNDGADTLEKDQTSVPQNCDRRPSLMEKNSTARIYEWDDSIDGLEGGTSNYASKFSLPTPKRRTLSPLKMYKPTSITKRRKAKKWSRLEEETLKAGVDKFGRGNWKLILNSHKDIFDERTEVDLKDKWRNMTRYGCK* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02475 403 Pfam Myb-like DNA-binding domain 349 397 IPR001005 -
Lapu9g02475 403 MobiDBLite consensus disorder prediction 260 291 - -
Lapu9g02475 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 343 402 IPR017930 -
Lapu9g02475 403 CDD SANT_TRF 349 399 - -
Lapu9g02475 403 SUPERFAMILY Homeodomain-like 350 401 IPR009057 -
Lapu9g02475 403 PANTHER MYB TRANSCRIPTION FACTOR 9 400 - -
Lapu9g02475 403 ProSiteProfiles Myb-like domain profile. 343 398 IPR001005 -
Lapu9g02475 403 Gene3D - 351 403 - -
Lapu9g02475 403 MobiDBLite consensus disorder prediction 248 292 - -
Lapu9g02475 403 SMART sant 347 400 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02475 Lapu-Chr9 39055333 39058595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02475 10 397 Single Myb Histone (SMH) Gene Family AT1G15720 28.846 4.52e-32 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu9g02475 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02475 - K11111 ccaj:109817184 469.544