Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02452 ATGGCCATTAGAAAATCAAACAAGACTTCTCAAACCACAGTCCTCAAGCAAATCCTCAAGAGATGCTCCAGCTTAGGAAAGAAAAACGACTACGACCATCACGATGATCTTCCTCTCGATGTCCCCAAAGGCCATTTCGCTGTCTACGTCGGAGAAAACAGAAGTAGATACATTGTCCCTATCTCCTTTTTGACTCACCCCCAGTTTCAGTCCCTCCTTCGACAAGCTGAGGAAGAGTTTGGCTTCGATCACGATATGGGACTCACTATTCCCTGCCAAGAAGTTGTTTTCCGCTCTTTAACATCCACGCTACGATGA 318 0.4591 MAIRKSNKTSQTTVLKQILKRCSSLGKKNDYDHHDDLPLDVPKGHFAVYVGENRSRYIVPISFLTHPQFQSLLRQAEEEFGFDHDMGLTIPCQEVVFRSLTSTLR* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02452 105 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Lapu9g02452 105 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 36 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02452 Lapu-Chr9 38924790 38925107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02452 38 100 Calmodulin-binding Proteins AT3G43120 55.556 3.59e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02452 K14488 - qsu:112040183 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02452 9 38924790 38925107 Lapu9g02452 9 38924790 38925107 ECH
Lapu9g02452 9 38924790 38925107 Lapu2g00750 2 6649891 6650937 ECH