Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02431 ATGAAGATCCAGTGTGATGTCTGTGACAAACTCCAAGCTTCAATCTTTTGTCCTGCAGATGAAGCTGCTCTTTGCCATACCTGCGATCGCACCATTCACCACGCCAACAAGCTCGCAACCAAACACCCTCGCTTCTCTCTCCTCTACCCCACCTCCAAACACTTCCCTCTCTGTGATATCTGCCAAGAGAAGCGTGCATATCTATTTTGCCAAGAAGACAGGGCACTGCTATGCAGGGAATGCGACCTTCCAATCCACAGAGCCAATGAGCTTACTCAGAACCATAACAGGTATCTTCTCACCGGTGTCAAGCTCTCCGCCACTTCTTTGGATTCTGCTTCCTCCTCCACCAATTGCACCGATACACTCGCCGCCTCTGAGGGAAAAAACGTTCGATCTCGAATCCACAGACCCCCCAGATCAGTTTCCAATGAGAATCTCAGCTCTTCTTGCAAGGCCGAAGACAACGTGGCCAGTGACACTGGTTCGGCTTCAACCAGCAGCATTTCTGAGTATCTCATTGAGACAATACCCGGTTACTGTTTCGAAGAACTCCTCGATGCTTCATTTGCACCTAATGGTTTCTGTAAGGTTTGCTTTACACCTTATAAATATGATACAACTTACGAGTATAACTTCTTTTTTCTTCCGAACTTTTGTTTAAACAACTTTGAACCGCGTTTGCTGTTGCTGTTGTTTTGTCGTTGTGGTCGCAGGAGCAGAACCATGATCTTCGTTGGGCATTTCAGGACCAAGATCTAG 762 0.4711 MKIQCDVCDKLQASIFCPADEAALCHTCDRTIHHANKLATKHPRFSLLYPTSKHFPLCDICQEKRAYLFCQEDRALLCRECDLPIHRANELTQNHNRYLLTGVKLSATSLDSASSSTNCTDTLAASEGKNVRSRIHRPPRSVSNENLSSSCKAEDNVASDTGSASTSSISEYLIETIPGYCFEELLDASFAPNGFCKVCFTPYKYDTTYEYNFFFLPNFCLNNFEPRLLLLLFCRCGRRSRTMIFVGHFRTKI* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02431 253 FunFam B-box zinc finger protein 21 1 98 - -
Lapu9g02431 253 CDD Bbox1_BBX-like 5 47 - -
Lapu9g02431 253 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lapu9g02431 253 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Lapu9g02431 253 CDD Bbox1_BBX-like 57 100 - -
Lapu9g02431 253 Gene3D Classic Zinc Finger 1 96 - -
Lapu9g02431 253 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 203 - -
Lapu9g02431 253 MobiDBLite consensus disorder prediction 129 164 - -
Lapu9g02431 253 SMART bboxneu5 53 100 IPR000315 GO:0008270
Lapu9g02431 253 SMART bboxneu5 4 47 IPR000315 GO:0008270
Lapu9g02431 253 Pfam B-box zinc finger 56 96 IPR000315 GO:0008270
Lapu9g02431 253 MobiDBLite consensus disorder prediction 140 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02431 Lapu-Chr9 38744976 38746462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02431 1 197 C2C2-CO-like Transcription Factor Family AT1G75540 52.153 1.20e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu9g02431 zf-B_box 3.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02431 - - gmx:100800981 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02431 9 38744976 38746462 Lapu9g02431 9 38744976 38746462 ECH
Lapu9g02431 9 38744976 38746462 Lapu2g00737 2 6526709 6531168 ECH