Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02427 ATGATTATTCCGGAGAAGAACCGTAAGGAGATCTGCAAATACCTCTTTCAAGAGGGAGTTTGCTATGCGAAGAAGGACTTCAATTTGGCGAAGCACCCAGAGATTGATGTGCCTAATTTGCAGGTGATTAAGCTGATGCAAAGTTTCAAGTCTCGCGAGTACGTGAGGGAGACCTTTGCTTGGATGCATTATTACTGGTTCCTCACCAACGATGGCATCGAGTTTCTCAGAACTTACCTTAACCTTCCTTCCGAAATTGTCCCTGCCACTTTGAAGAAACAGGCCAAGCCACCTGGCAGACCTTTTGGTGGCCCATCCGGTGATCGCCCCAGGGGTCCGCCTCGCTTTGAAGGCGAGCGGAGATTTGGCGGTGATCGGGACGGATATCGTGGAGGTCCCCGAGGACCTGGTGGAGACTTTGGAGGAGACAAAGGAGGAGCTCCTGCCGACTACAGGCCCTCTTTTGGGGGAGCTGGAGGAAGGCCTGGCTTTGGTCGCGGATCTGGTGGTTTTGGGGCGCCAACCAGCTCAAATATTCCTTAA 543 0.5249 MIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRPFGGPSGDRPRGPPRFEGERRFGGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGAGGRPGFGRGSGGFGAPTSSNIP* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02427 180 MobiDBLite consensus disorder prediction 112 128 - -
Lapu9g02427 180 Pfam Plectin/S10 domain 3 94 IPR005326 -
Lapu9g02427 180 Gene3D - 1 104 IPR036388 -
Lapu9g02427 180 PANTHER 40S RIBOSOMAL PROTEIN S10 1 174 IPR037447 -
Lapu9g02427 180 MobiDBLite consensus disorder prediction 91 180 - -
Lapu9g02427 180 FunFam 40S ribosomal protein S10 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02427 Lapu-Chr9 38710118 38712037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02427 1 180 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 75.000 9.66e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02427 K02947 K09422 gmx:100500445 230.335