Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02401 ATGGATCTTTGGGTCAGCGTTGGTGAGATGGGGACTGTGTGGTTTGGGTTGTTGTTGCTGCTGGCGGTGAGTCAGGTGACATTGGAGCAGATTGAGCCACTGAGTTCCCCTGAGGAGCGAGAATCGTTACTTGAACTGAGGGCTTCTCTGGGGTTGAGGAGCAAGGAATGGCCAAGAAAACCAGACCCTTGTTTACTCTGGGTTGGCATCACATGCCAGAATGGTCGAGTCGTTGGGATCAATATCTCTGGGTTTAAAAGAACCAGACTTGGGAGGAGGAACCCGCAATTTTCAGTGGATGCTTTGGCCAATTTCACTCTCTTGCAGTCCTTCAATGCCTCCAATTTCCTCCTTCCTGGACCTATTCCTGATTGGTTTGGTCTCTCCCTTCCTTCTCTCAGAGTGCTTGATCTTCGTTCTTGTTCCATTGTTAATGCTATTCCCTCCACTCTTGGCAATTTGACCAACCTCACTAGTCTCTATCTCTCTGACAACAACCTCAATGGGAATGTTCCTGAGTCTTTGGGTCAACTCTCCGCCCTTTCGATTCTTGATCTTTCCAGGAATTCTCTTACTGGCTTCATACCAACGTCTTTTGCGTTTCTTGGGAATCTTTCCTCCCTTGACATGTCTGCCAATTTTTTGTTGGGGCCGATTCCCCCTGGCATAGGTTCTCTTTCCAGGTTACAGTACTTGAATCTTTCCAACAATGGACTTGCCTCTCTGCCTTCCCAGTTGGGGGGTCTAACTAGCTTAGTTGTCCTTGATCTTAGTCAGAATTCTTTTGCCAGTGGCGGACTGCCCCCGGATTTGGTTGGGTTGAGGAACTTGCAGCGGATGATACTCGCCAACAGCATGCTCACCGGAGTTCTGCCAGGGAGACTGTTTACTGGTTCATTGCAGTTGCAGTTCCTGGTGCTGAGGCAGAACAATTTTAGTGGTTCTTTGCCTGTTGAGTTGTGGTCTCTGCCAAGATTGAGCTTCCTTGATGTGTCTGCCAATAATTTGAGTGGTCTGCTTCCTAATTCGAGTCTGGCTGCTAATGCTACTGTTGCGGTGCTCAATATTTCGCACAATAAGTTTTATGGAGGCCTCACTCCTGCTTTGAGAAGGTTTGGGTTTGTTGATCTCTCAAACAATTATTTTGAGGGCAAGGTTCTGGATTTCATGCATAATGTATCTCTAAATAGCAACTGTCTCCAGAACGCAACAAATCAGAGGTCAACGGTGGAATGTGCATCATTTTATGCAGAGAGGGGGCTCGATTTTGATAATTTTGGACACCCGAATACAACACAACCTCCTGCCTCCCAAAGCTCCGGAAAGAGCAACAAGACTAAGATTATACTGGCTGCAGTCTTGGGTGGATTGGGTTTAATTGCACTTTTGGTGTTGCTAGTGGTTCTGTTGCTTCTGTGTGCTCGTAAGAGGGGTCATTCAAATCAGAGAGGAAATGGTGTGGGTCCTGCTCCTGTTGGCAGCAGTCCTACAAACCCCGGTGTACCAATTGAATTTCCAAATGTAGGAGACTCATTTACATATCATCAGTTGCTCCAGGCAACAGGAGATTTCAATGATGCAAATCTTATCAAACATGGCCACACTGGGGACTTCTTCAATGGTGTTTTGGAAAGTGGGATTCCTGTCGCCATCAAAAGGATTGACATGCGATCAGCTAAAAAGGAGGCTTACCTGTCGGAGTTGGACTTCTTCAATAAGGTTTCTCATCAGAGATTTGTTCCACTATTAGGTCATTGCTTAGAAAATGAGAATGAGAAGTTTCTGGTTTATAAAAACATGCCAAATGGGGACTTGTCTAATTGCTTGTTCTACAAAAATACTACATCTGAAGATGGTACTTTGCAATCACTGGACTGGATAACCAGGTTAAAAATTGCTACTGGAGCGGCAGAGGCCCTGTCGTATCTACATCATGAATGTGTTCCACCCATTGTTCACAGGGATATTCAAGCAAGCAGTATACTTCTTGACGACAAATACGAAGTTCGGTTGGGAAGTCTAAGTGAAGCCTGTGCTCAAGAAGGTGAAATTCATCAAAGTAAGATCACTCGGTTTCTGCGGTTGCCTCAGTCCTCTGACCAAGGCCCATCTGGTTCTTCAACAACAATTTGTGCCTACGACGTTTATTGCTTTGGAAAAGTTTTACTTGAACTGGTGACCGGTAGGCTGGGAATGAGTGCAGCCAGTGACGCAGAAGTAAAGGAATGGTTTGATCAGATTCTACCTTGCATTAATATGTATGAGAAGGAACTTGTGACGAAAATTATTGATCCATCGATGGTTGTTGATGATGATTTCCTAGAGGAAGTATGGGCTATAGCCATAGTTGCCAGATCTTGCTTAAATCCCAAACCTACAAGGAGACCCCCAATGAGATATATTCTGAAGGCTTTGGAAAACCCTTTGAAGGTGGTGAGGGAAGAAAATTCCAGTTCTGCGCGGCTTAGAGCAACCTCTTCTAGAGGTTCTTGGAATGCTGCTACTTTGTTTGGGAGTTGGCGTCAGAGTTCTTCTGATGTAACAGCAACTCCAGCAGCCTCTGGTATAAAACTAGAAAGAGCTAGTAGCTTAAAACTGTCAGGAACAACTGGGTCGCAGTCACAGGGTAGTTTCCACAATGGCGGCGGTGAGATTTCGTTGTCGCGGAGGCGACACTCGAAGGAGATATTCCCGGAGCCTTCAGGCGTTCATGATGTAGAGAGTCCCCACGTTGATGACGAGAGTGGGCAAGTTGATGGAGCGTGCTCGAGTGCAATGGCGGCATCCGCCACCGTCTCCGGCGGTGCGCTGACGGATCTAACTCTCCGAACCCCTTTTCTCGGCCTCAAACTCTACACCCTGCTCCTCATTTTAGTTATAATGGTTGTGGCAGCGCTGTTCCTGATCCTCCTCTGCGTCCGTCGGAGCTCGAAGAAGAGGAAAATGCGAGTGAAGCACAGCTCCGGCGCGATCCCGCTGGTGTCGAAGGAGATCGTGGAGGTGAATACTCTGGAGCTGAAAATCGAAGAGGTGGATGAGGAGGATCCGAAGAAGGAGATGGAGCTTGAAGAGAGTCCGTCGGTGGAGTCACCGAACATAGGGTGGGGACGCTGGTACAGCCTCAGAGAGCTTGAGACTGCGACGCAAGGGTTCGCCGAAGGGAATGTGATCGGAGAAGGAGGGTATGGGATTGTGTATAGGGGAAATTTGCTAGACGGTTCTGTCGTCGCTGTCAAAAATCTTCTCAACAACAAGGGGCAAGCAGAGAAAGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTGAGGCATAAGAATTTGGTGGGGTTAGTTGGATATTGTGCAGAAGGTGCTCAAAGGATGCTTGTTTATGAATATGTTGACAATGGAACATTGGAACAGTGGCTGCATGGTGAAGTAGGACCTGTCAGCCCCTTGACATGGGATATACGAATGAAGATTGCTGTTGGGACTGCGAAAGGGCTAGCCTACTTGCACGAAGGATTGGAACCCAAAGTTGTCCATCGAGACGTAAAATCCAGTAACATTCTTTTGGACAAAAAGTGGAATGCTAAAGTATCAGACTTTGGACTGGCCAAGCTCTTAGGGCCCGAGAAAAGCTATGTGACAACACGTGTAATGGGGACATTTGGATATGTGTCACCTGAGTATGCAAGCACGGGAATGCTTAATGAGGGCAGCGATGTGTATAGTTTTGGCATTCTACTTATGGAGCTAATTACAGGAAGGAGTCCCATCGATTATTCTAGACCACCTGGAGAGATGAACTTGGTTGATTGGTTTAAAGGAATGGTTGCAAATCGTCGTGGTGATGAACTAGTTGATCCTTTAATAGATATTCAGCCCTCTCAAAGATCTTTGAAACGAGCTTTACTCGTTTGTCTGCGTTGCATAGATTTGGATGTCAGTAAGCGACCAAAGATGGGCCAAATTGTTCATATGCTTGAGGCTGACGATTTTCCCTTTCGTTCTGAACACAGAACAAATAGAGAGAAAGAGCCTGTTAATTCTAAAGCAGCTGCTTCCAGCAAGATTCCATATGCAACAAGGCATGTAGAGCCTATTGATAAATCAAGCTGGAGATGA 4107 0.4643 MDLWVSVGEMGTVWFGLLLLLAVSQVTLEQIEPLSSPEERESLLELRASLGLRSKEWPRKPDPCLLWVGITCQNGRVVGINISGFKRTRLGRRNPQFSVDALANFTLLQSFNASNFLLPGPIPDWFGLSLPSLRVLDLRSCSIVNAIPSTLGNLTNLTSLYLSDNNLNGNVPESLGQLSALSILDLSRNSLTGFIPTSFAFLGNLSSLDMSANFLLGPIPPGIGSLSRLQYLNLSNNGLASLPSQLGGLTSLVVLDLSQNSFASGGLPPDLVGLRNLQRMILANSMLTGVLPGRLFTGSLQLQFLVLRQNNFSGSLPVELWSLPRLSFLDVSANNLSGLLPNSSLAANATVAVLNISHNKFYGGLTPALRRFGFVDLSNNYFEGKVLDFMHNVSLNSNCLQNATNQRSTVECASFYAERGLDFDNFGHPNTTQPPASQSSGKSNKTKIILAAVLGGLGLIALLVLLVVLLLLCARKRGHSNQRGNGVGPAPVGSSPTNPGVPIEFPNVGDSFTYHQLLQATGDFNDANLIKHGHTGDFFNGVLESGIPVAIKRIDMRSAKKEAYLSELDFFNKVSHQRFVPLLGHCLENENEKFLVYKNMPNGDLSNCLFYKNTTSEDGTLQSLDWITRLKIATGAAEALSYLHHECVPPIVHRDIQASSILLDDKYEVRLGSLSEACAQEGEIHQSKITRFLRLPQSSDQGPSGSSTTICAYDVYCFGKVLLELVTGRLGMSAASDAEVKEWFDQILPCINMYEKELVTKIIDPSMVVDDDFLEEVWAIAIVARSCLNPKPTRRPPMRYILKALENPLKVVREENSSSARLRATSSRGSWNAATLFGSWRQSSSDVTATPAASGIKLERASSLKLSGTTGSQSQGSFHNGGGEISLSRRRHSKEIFPEPSGVHDVESPHVDDESGQVDGACSSAMAASATVSGGALTDLTLRTPFLGLKLYTLLLILVIMVVAALFLILLCVRRSSKKRKMRVKHSSGAIPLVSKEIVEVNTLELKIEEVDEEDPKKEMELEESPSVESPNIGWGRWYSLRELETATQGFAEGNVIGEGGYGIVYRGNLLDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGAQRMLVYEYVDNGTLEQWLHGEVGPVSPLTWDIRMKIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGPEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELITGRSPIDYSRPPGEMNLVDWFKGMVANRRGDELVDPLIDIQPSQRSLKRALLVCLRCIDLDVSKRPKMGQIVHMLEADDFPFRSEHRTNREKEPVNSKAAASSKIPYATRHVEPIDKSSWR* 1369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02401 1368 MobiDBLite consensus disorder prediction 479 500 - -
Lapu9g02401 1368 Gene3D Transferase(Phosphotransferase) domain 1 1127 1345 - -
Lapu9g02401 1368 Gene3D Transferase(Phosphotransferase) domain 1 600 827 - -
Lapu9g02401 1368 FunFam Probable serine/threonine-protein kinase At1g01540 1031 1126 - -
Lapu9g02401 1368 FunFam Predicted protein 494 599 - -
Lapu9g02401 1368 SUPERFAMILY Protein kinase-like (PK-like) 1030 1323 IPR011009 -
Lapu9g02401 1368 PANTHER OS01G0323000 PROTEIN 1027 1346 - -
Lapu9g02401 1368 MobiDBLite consensus disorder prediction 1330 1368 - -
Lapu9g02401 1368 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 36 195 - -
Lapu9g02401 1368 Gene3D Ribonuclease Inhibitor 200 422 IPR032675 -
Lapu9g02401 1368 Gene3D Phosphorylase Kinase; domain 1 503 598 - -
Lapu9g02401 1368 Gene3D Phosphorylase Kinase; domain 1 1013 1126 - -
Lapu9g02401 1368 ProSitePatterns Protein kinases ATP-binding region signature. 1057 1079 IPR017441 GO:0005524
Lapu9g02401 1368 Pfam Protein tyrosine and serine/threonine kinase 530 803 IPR001245 GO:0004672|GO:0006468
Lapu9g02401 1368 Pfam Leucine Rich repeats (2 copies) 228 262 IPR025875 -
Lapu9g02401 1368 Coils Coil 994 1014 - -
Lapu9g02401 1368 MobiDBLite consensus disorder prediction 898 914 - -
Lapu9g02401 1368 SMART LRR_typ_2 249 274 IPR003591 -
Lapu9g02401 1368 SMART LRR_typ_2 154 177 IPR003591 -
Lapu9g02401 1368 SMART LRR_typ_2 178 201 IPR003591 -
Lapu9g02401 1368 SMART LRR_typ_2 130 153 IPR003591 -
Lapu9g02401 1368 SMART LRR_typ_2 226 248 IPR003591 -
Lapu9g02401 1368 SMART LRR_typ_2 323 346 IPR003591 -
Lapu9g02401 1368 Pfam Leucine rich repeat 155 213 IPR001611 GO:0005515
Lapu9g02401 1368 Gene3D Ribonuclease Inhibitor 36 199 IPR032675 -
Lapu9g02401 1368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1173 1185 IPR008271 GO:0004672|GO:0006468
Lapu9g02401 1368 ProSiteProfiles Leucine-rich repeat profile. 228 250 IPR001611 GO:0005515
Lapu9g02401 1368 Pfam Protein kinase domain 1053 1320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02401 1368 CDD STKc_IRAK 1057 1323 - -
Lapu9g02401 1368 SUPERFAMILY Protein kinase-like (PK-like) 497 805 IPR011009 -
Lapu9g02401 1368 SUPERFAMILY L domain-like 100 423 - -
Lapu9g02401 1368 SMART serkin_6 1051 1329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02401 1368 ProSiteProfiles Protein kinase domain profile. 1051 1315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02401 1368 FunFam Leucine-rich repeat receptor protein kinase EMS1 196 294 - -
Lapu9g02401 1368 FunFam Putative LRR receptor-like serine/threonine-protein kinase 600 825 - -
Lapu9g02401 1368 MobiDBLite consensus disorder prediction 898 920 - -
Lapu9g02401 1368 ProSiteProfiles Protein kinase domain profile. 524 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02401 1368 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 298 428 - -
Lapu9g02401 1368 FunFam Putative receptor-like serine/threonine-protein kinase 1127 1337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02401 Lapu-Chr9 38506270 38523951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02401 39 697 Miscellaneous Gene Families AT2G16250 57.958 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lapu9g02401 PK_Tyr_Ser-Thr 3.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02401 - - gmx:100805769 1471.45