Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02385 ATGGCGTACCAAGCGATCCAGGGTCCTAGTTCGGGATCGAGTTCCAGTTCGGGGTTTCAGCTACTGAATTCTCCTTTTGGAGACACCACTTACACCAAAGTCTTCGTCGGAGGGTTGGCCTGGGAGACTCAGAGCGAAACCATGCGCCGCTACTTCGAGCAGTTCGGCGAGATTCTCGAGGCTGTTGTCATCACCGATAAGAACACAGGGCGATCCAAGGGCTATGGTTTCGTGACTTTCCGGGATCCCGAGGCTGCAAGGAGAGCCTGTGCTGATCCAACTCCTGTTATTGATGGTAGAAGGGCGAATTGTAACCTGGCTTCACTTGGTCGTCCACGACCCCCTTTGCCTTATGGACGGGTAAGACCTGCCTCCCCTTATGTTGGAAGTGTGCAAACAGCTCGTGGTGCTTATGTGGGAGGTTTTGGGTACCAGCAACCGCTTTCCTACAGCTATCAACAAGGATTAGTTTACCCCCCTTACGGGTATACGGCATATGGACCTGAGTACATCTACCCACAGAGTCTGTACAACCCATATATGGGGCAACAGTACCTTCAGTTATATGGAGTGCCTGGGACAGTGAATACAACTATTTATCCATATGGACAATTGGGTCAGGCTATTCCTAGTGGTCATGGTTATTCCGCAGTGCAGGGTTATACAGTACCAGGTCATCAGATTGTGCCCTATGGGGGATCCAATGTTAATGCCATAACAACTTCACCTATGCCTGCCATTCAAGCTTCATTTCCTAGTGGTATGGTTGTCTACCATAAAAAATTTTCATTTATGACTCAGAATGTGCCCTTTTTGTTGAATTGCTGCACCGGTTCCTGGCCAACCACAATTTATTGTTCCTGCTCCTTCTCCTCAGTTCATGCAAGGTAG 891 0.4905 MAYQAIQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPYGRVRPASPYVGSVQTARGAYVGGFGYQQPLSYSYQQGLVYPPYGYTAYGPEYIYPQSLYNPYMGQQYLQLYGVPGTVNTTIYPYGQLGQAIPSGHGYSAVQGYTVPGHQIVPYGGSNVNAITTSPMPAIQASFPSGMVVYHKKFSFMTQNVPFLLNCCTGSWPTTIYCSCSFSSVHAR* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02385 296 PANTHER BOULE-RELATED 10 256 - -
Lapu9g02385 296 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 109 IPR000504 GO:0003723
Lapu9g02385 296 SMART rrm1_1 33 105 IPR000504 GO:0003723
Lapu9g02385 296 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 26 113 - -
Lapu9g02385 296 SUPERFAMILY RNA-binding domain, RBD 31 139 IPR035979 GO:0003676
Lapu9g02385 296 Gene3D - 4 117 IPR012677 -
Lapu9g02385 296 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 90 IPR000504 GO:0003723
Lapu9g02385 296 CDD RRM_RBM24_RBM38_like 32 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02385 Lapu-Chr9 38367755 38373574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02385 21 108 C2H2 Transcription Factor Family AT2G19380 43.182 4.11e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02385 - - gmx:100779244 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02385 9 38367755 38373574 Lapu9g02385 9 38367755 38373574 ECH