Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02379 ATGCTGCCAATGGAAGAGCTACTGTGTGAACTTAGTGATCACGAAAAGAGAAACGAGCAAGGTCTGCCACCGGGTTTCAGGTTTCACCCCACTGATGAAGAACTTATAACCTTTTACTTGGCTTCAAAAGTTTTTAATGGGAGCTTCACTAGTGTCAAGTTTGCTGAGGTTGATCTCAATAGATGTGAGCCTTGGGAACTTCCAGATGCGGCAAAGATGGGGGAGAGAGAGTGGTATCTGTTCAGCTTGAGGGACAGAAAATACCCAACTGGACTCAGAACAAACAGGGCCACCGGAGCTGGGTACTGGAAAGCCACTGGGAAGGACAAGGAGGTGTTCAGTGCATCAAGTGGAACCCTACTTGGGATGAAGAAGACCCTTGTTTTCTACAAAGGAAGGGCCCCGCGTGGAGAAAAGACCAAATGGGTAATGCATGAGTACCGTTTGGACGGTGACTTTTCCCTTCCCCACCCACACCCTCATCACATCTCCAAGGAGGAGTGGGTGATATGCAGGATATTTCATAAATCCGGGGAAAAGAGGACTCCACTGCTCCAAGTCCAAGGACATTCAGATGCTTCTTCCTCCCCAACAAAAAATGCTTTACCTCCTTTACTTGCCAGCCCAACTTCCTTTCCACTGGCACTAGAATGTCAATCCCAAAGTCCGGTTCTCCTTCACCACCACCAACACCAAAATCACCTCTCTCATTCTCACCCTTTTCTTTTCCCATTGCATGCATCACCACAACTCACTAACGCCAGAAACCATCCATCATTTTCTGACCTATTCTTCAAGCCCCTCCATCTCTCACAACAAAACTACATCCTCAAGTCCAAGGAAAAAACCGTTCCAAAAGCAATCAAGACGGAGGAGGCTGCAGCATTCTATCAGTACCATTTACTAGATGACGCTAACAACTTCCGGTTGAACCAAAATCAAAGTAATTTCCCAAACCCTTTCCCTGATGCTGAGGTGGATGCTGGGCTGGTGGCATTTTCAGGAGGTCCAAATGCTGAAGTTAGGGACATGTCCACTTCAACAGCCTTCAATAGGGTAGGGTTGCAGCAGGTCATAGATGCTGCTCATATCGGAATAGATTCTTGGCCTCTGGCCCAGCATGTTTAG 1128 0.4743 MLPMEELLCELSDHEKRNEQGLPPGFRFHPTDEELITFYLASKVFNGSFTSVKFAEVDLNRCEPWELPDAAKMGEREWYLFSLRDRKYPTGLRTNRATGAGYWKATGKDKEVFSASSGTLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSLPHPHPHHISKEEWVICRIFHKSGEKRTPLLQVQGHSDASSSPTKNALPPLLASPTSFPLALECQSQSPVLLHHHQHQNHLSHSHPFLFPLHASPQLTNARNHPSFSDLFFKPLHLSQQNYILKSKEKTVPKAIKTEEAAAFYQYHLLDDANNFRLNQNQSNFPNPFPDAEVDAGLVAFSGGPNAEVRDMSTSTAFNRVGLQQVIDAAHIGIDSWPLAQHV* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02379 375 ProSiteProfiles NAC domain profile. 22 176 IPR003441 GO:0003677|GO:0006355
Lapu9g02379 375 Gene3D NAC domain 31 180 IPR036093 GO:0003677|GO:0006355
Lapu9g02379 375 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 250 - -
Lapu9g02379 375 FunFam NAC domain-containing protein 100-like 31 180 - -
Lapu9g02379 375 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
Lapu9g02379 375 SUPERFAMILY NAC domain 17 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02379 Lapu-Chr9 38340066 38342638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02379 1 234 NAC Transcription Factor Family AT1G76420 60.924 1.11e-96 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu9g02379 NAM 1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02379 - - gmx:100780313 529.635