Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02370 ATGAATTTGTTTGGGGTAGTTTGTTGGGTGGTGTGGTGTTTGGGAATATCATCACGGGTGGTATCTCCGTTTGTGGGGGCTGCAAACGTGTCATCCTCAAGACCCGCCGTTGTCAACATTGGAGCAATCTTCAACATCGATTCTGTTCTTGGGAGAGTGGCTAAAATTACATTGGAGGAAGCCGTGAAAGACGTAAACGCCGACACTAACATTCTACGTGGAACTAAAATTGTTCTCACTATGCAAAATTCTAATTACAGCGGTTTCTTAGGCATGGTTCAAGCTTTGCGGTTCATGGAGACTGATGTGGTTGCTATAATAGGACCGCAATCTTCTGTGGTTGCTCACATAATATCCCATGTTGCAAATGAACTACGGGTTCCTTTATTGTCATTTGCAGCAACAGACCCTACCCTCACATCGCTGCAGTTTCCTTTCTTTGTGAGGACAACACAGAGTGATTTGTACCAAATGAAGGCTGTTGCTGAAATCATTGATTACTATGGTTGGAAGGAGGTGATTGCCATATATGTGGATGATGATTATGGACGAAATGGTGTGGCTGCTTTAGATGATGAACTAGCTGCCAGGCGCTGTAGAATCTCCTTCAAGGAAGGGATTAACTCCGGAGCTGAAGTCGACCGGGGAGAAATTACTAGTTTGCTTGTGAAAGTGGCACTGATGCAGTCTCGGGTCATTGTTCTCCATGCACAGACTGACTATGGTTTTATGGTTTTCAATGTGGCGCGATATCTTGGGATGACAGACAATGGCTATGTGTGGATAGTCACAGACTGGCTCTCTTCACTTTTGGATTCTGCTTCTCTCCCTTCAGAGACAATGGAAGTTCTCCAGGGAGTACTTGTTCTGCGCCAGCATACAACTGATTCAGATAGAAAAAGGGCATTTTTCTCTAGGTGGAACAAGTTGACTGGTGGCTCTTTGGGATTGCATTCTTATGGCCTCTATGCTTATGATTCTGTTTGGCTTGTTGCACGGGCCATTGATGCTTTTTTCAGTCAGGGTGGGGCTATTTCGTGTACCAATTACACAAGTTTAGGTGGTGATGATAAGGGAGGTGATTTGAACCTTGATGCAATGAGCATTTTTGACAATGGAACGCTTCTGCTGAAGAACATACTGCAGAGTGATTTTGTTGGACTATCAGGTCGAATGAAATTTGAACCAGATCGATCTCTCGTTCATCCTGCCTATGACGTCCTTAATGTGGTTGGAACTGGTCTTAGGAGGGTTGGTTACTGGTCCAACTATTCTGGTCTGTCAATTGTATCTCCTGAGATATTGTATGCAAAGCCACCTAATAGATCTAGTGCGAACCAGAAGCTTTACAGTGTGATATGGCCTGGAGAAACATTATCTAAACCCCGTGGATGGGTCTTCCCAAATAATGGTAGACAGTTGAGAATTGGTGTGCCTATCCGAGTCAGTTACCGTGAATTTGTCTCACCAGTGAAGGGAACTGAGATATTTAAAGGTTTTTGTGTTGATGTATTCACAGCAGCTCTGAACTTGTTGCCTTATGCTGTTCCTTACCACTTTGTCCCATTTGGAGACGGACACAAAAATCCAAGCTACACAGAACTTGTCCACTTAATCACAACTGGTTACTTTGACGGTGCCATCGGTGACATTGCTATTGTCACAAATCGGACAAGGATTGTAGATTTTACGCAGCCATATGCAGCATCGGGACTTGTTGTGGTGGCCCCATTCACAAAAATTAATTCTGGTGGCTGGGCTTTCCTACAGCCATTTACTCCTCTTATGTGGATTGTGACCGCTAGTTTCTTTCTTTTCATTGGGATGGTTATATGGATTCTGGAACACAGGATAAATGATGAGTTCAGAGGTCCACCTAGACAGCAAATTATAACTTTGTTATGGTTTAGCCTGTCAACTCTGTTTTTTTCCCACAGAGAGAATACCATGAGTGGTCTTGGTCGGTTTGTGATGCTCATATGGCTATTTGTGGTTTTGATCCTCACTTCCAGCTACACTGCAAGTTTAACATCCATACTCACAGTGCAACAGTTATCTTCTCCTATCAGTGGAATAGATAGCTTAAAGGCCAGTGATGAACCTATAGGATTCCAAGTGGGTTCATTTGCAGAACATTACTTGATTCAAGATATTGGAATATCCGAATCTAGGCTTATTGCCCTTGGATCTCCAGAAGAATATGCTAAGGCCCTTCAGCTTGGTCCTAAAAGAGGAGGTGTTGCTGCTATTGTTGATGAACGACCTTATGTTGAAATCTTCTTATCAAGCCAGTGCAAATTCAGAATTGTCGGTCAGGAGTTCACCAGAAGTGGATGGGGTTTTGCGTTCCCTCGGGACTCCCCTTTGGCTGTGGACATGTCAACGGCCATTCTACAACTTTCTGAAACTGGCGATCTACAGCGGATTCATGACAAGTGGATGACACGAAGCTCTTGTAGTTTAGACAATGCTGAAATTAACTCAGATCGTCTTCAGCTTGAAAGCTTCTGGGGTCTCTTTCTCATTTGCGGGATAGCTTGCTTTGTTGCTCTTCTTTTGCATTTTTTGCAGCTTATGTTTCAGTTATGGAAATCTCCTTCTGAACCTGCTGCTTCTACTGCTTCCTCAATTTCTGGTCGTTTTCAAAGATTTCTTTCACTCATTGATGAGAAAGAAGATCCATCAAGGAGTAAAGGAAGAAAGAGAAATGGAGACGAAAGATCACTTGAAGATCAACCGGGAAGGAAGTCAAAGAGGGTACAACTACAAACAGAAATGACTACCTAA 2787 0.4331 MNLFGVVCWVVWCLGISSRVVSPFVGAANVSSSRPAVVNIGAIFNIDSVLGRVAKITLEEAVKDVNADTNILRGTKIVLTMQNSNYSGFLGMVQALRFMETDVVAIIGPQSSVVAHIISHVANELRVPLLSFAATDPTLTSLQFPFFVRTTQSDLYQMKAVAEIIDYYGWKEVIAIYVDDDYGRNGVAALDDELAARRCRISFKEGINSGAEVDRGEITSLLVKVALMQSRVIVLHAQTDYGFMVFNVARYLGMTDNGYVWIVTDWLSSLLDSASLPSETMEVLQGVLVLRQHTTDSDRKRAFFSRWNKLTGGSLGLHSYGLYAYDSVWLVARAIDAFFSQGGAISCTNYTSLGGDDKGGDLNLDAMSIFDNGTLLLKNILQSDFVGLSGRMKFEPDRSLVHPAYDVLNVVGTGLRRVGYWSNYSGLSIVSPEILYAKPPNRSSANQKLYSVIWPGETLSKPRGWVFPNNGRQLRIGVPIRVSYREFVSPVKGTEIFKGFCVDVFTAALNLLPYAVPYHFVPFGDGHKNPSYTELVHLITTGYFDGAIGDIAIVTNRTRIVDFTQPYAASGLVVVAPFTKINSGGWAFLQPFTPLMWIVTASFFLFIGMVIWILEHRINDEFRGPPRQQIITLLWFSLSTLFFSHRENTMSGLGRFVMLIWLFVVLILTSSYTASLTSILTVQQLSSPISGIDSLKASDEPIGFQVGSFAEHYLIQDIGISESRLIALGSPEEYAKALQLGPKRGGVAAIVDERPYVEIFLSSQCKFRIVGQEFTRSGWGFAFPRDSPLAVDMSTAILQLSETGDLQRIHDKWMTRSSCSLDNAEINSDRLQLESFWGLFLICGIACFVALLLHFLQLMFQLWKSPSEPAASTASSISGRFQRFLSLIDEKEDPSRSKGRKRNGDERSLEDQPGRKSKRVQLQTEMTT* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02370 928 PIRSF IGluLR_plant 7 928 IPR017103 -
Lapu9g02370 928 MobiDBLite consensus disorder prediction 888 918 - -
Lapu9g02370 928 FunFam Glutamate receptor 711 818 - -
Lapu9g02370 928 Gene3D - 780 813 - -
Lapu9g02370 928 SUPERFAMILY Periplasmic binding protein-like II 450 816 - -
Lapu9g02370 928 Gene3D - 469 584 - -
Lapu9g02370 928 PRINTS Metabotropic glutamate GPCR signature 138 157 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lapu9g02370 928 PRINTS Metabotropic glutamate GPCR signature 173 190 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lapu9g02370 928 PRINTS Metabotropic glutamate GPCR signature 157 173 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lapu9g02370 928 PRINTS Metabotropic glutamate GPCR signature 106 132 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lapu9g02370 928 MobiDBLite consensus disorder prediction 888 928 - -
Lapu9g02370 928 Gene3D - 585 712 - -
Lapu9g02370 928 Gene3D - 153 427 - -
Lapu9g02370 928 FunFam Glutamate receptor 153 305 - -
Lapu9g02370 928 Gene3D - 57 402 - -
Lapu9g02370 928 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 865 IPR015683 -
Lapu9g02370 928 FunFam Glutamate receptor 585 715 - -
Lapu9g02370 928 Pfam Receptor family ligand binding region 59 412 IPR001828 -
Lapu9g02370 928 FunFam Glutamate receptor 469 584 - -
Lapu9g02370 928 CDD PBP1_GABAb_receptor_plant 39 430 IPR044440 -
Lapu9g02370 928 CDD GluR_Plant 472 813 - -
Lapu9g02370 928 Pfam Bacterial extracellular solute-binding proteins, family 3 496 815 IPR001638 -
Lapu9g02370 928 Gene3D - 746 779 - -
Lapu9g02370 928 SMART GluR_14 475 816 IPR001320 GO:0015276|GO:0016020
Lapu9g02370 928 SUPERFAMILY Periplasmic binding protein-like I 32 466 IPR028082 -
Lapu9g02370 928 Pfam Ligand-gated ion channel 816 847 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02370 Lapu-Chr9 38262208 38267823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02370 32 919 Ion Channels AT1G42540 64.811 0.0 1252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02370 K05387 - gmx:102661260 1639.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02370 9 38262208 38267823 Lapu9g02370 9 38262208 38267823 ECH