Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02358 ATGAGTTGTTTTTCGTGCTTTGTTTCTCGCCGGAAAGATGTGAGGAGGGTGGAAATTGACAATGGCACTCGATCTGCTACTGCTACTTCCTCAGAGGGTGAAAGGAAGAGAGAATCATCCTCAGAGGCAAAGGGGAAGAGTGTGAGTAGTAGTAAAGGAAGTACCGCAGCGGCTAGTTTTGGTTTTCGCGAACTCGCTGCGGCGACGAGGGGCTTCAAGGAAGTGAATTTAATCGGGGAAGGTGGTTTTGGAAGGGTTTACAAGGGTCGACTTTCAGCGGGCGAGCTCGTTGCCGTGAAACAATTGAGTCATGATGGTCGACAAGGTTTTCAGGAATTTGTGACGGAGGTTCTTATGTTGAGCCTGCTGCACCATTCTAATCTTGTGAAGTTAATTGGCTACTGCACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCCATGGGTTCACTGGAAGATCATCTTTTTGATCCTACCCAAGACAAAGAACCCCTAAGTTGGAATTCTCGAATGAAAATTGCTGTTGGAGCAGCTCGAGGCCTCGAGTATCTACATTGCAGAGCAGATCCACCTGTTATCTACAGAGACTTGAAATCTGCAAATATCTTGTTAGATAATGAATTCAACCCGAAATTGTCAGATTTTGGGCTCGCTAAACTTGGACCTGTTGGAGACAATACCCATGTTTCAACTAGAGTGATGGGAACATATGGCTACTGTGCGCCTGAGTATGCCATGAGTGGCAAATTAACTCTTAAATCTGATATCTACAGCTTTGGCGTGGTTTTGTTGGAGTTGATCACTGGACGTAGAGCAATAGATGCCGGTAGGAAACCAGGAGAACAAAACTTGGTTTCGTGGTCTCGTCCATTTTTCAGTGACCGGAGAAAGTTTGTGCATATGGTTGACCCTCTTTTACAAGGCAACTTCCCCTTGCGCTGTCTGCATCAGGCAATTGCTATAACTGCTATGTGTTTACAAGAGCAACCAAAATTCCGTCCACTTATTGGTGATATTGTTGTTGCACTGGAATACCTAGCTTCTCAGAATATTGCCGAAGTGCATAGACATGGTGAGCGCAGCTCACCGCAACAACAAAAGGACAGAAATTAA 1119 0.4513 MSCFSCFVSRRKDVRRVEIDNGTRSATATSSEGERKRESSSEAKGKSVSSSKGSTAAASFGFRELAAATRGFKEVNLIGEGGFGRVYKGRLSAGELVAVKQLSHDGRQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDPTQDKEPLSWNSRMKIAVGAARGLEYLHCRADPPVIYRDLKSANILLDNEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDAGRKPGEQNLVSWSRPFFSDRRKFVHMVDPLLQGNFPLRCLHQAIAITAMCLQEQPKFRPLIGDIVVALEYLASQNIAEVHRHGERSSPQQQKDRN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02358 372 SUPERFAMILY Protein kinase-like (PK-like) 53 346 IPR011009 -
Lapu9g02358 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Lapu9g02358 372 Gene3D Transferase(Phosphotransferase) domain 1 148 369 - -
Lapu9g02358 372 Gene3D Phosphorylase Kinase; domain 1 29 147 - -
Lapu9g02358 372 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Lapu9g02358 372 SMART serkin_6 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02358 372 PANTHER OS07G0668900 PROTEIN 3 355 - -
Lapu9g02358 372 CDD STKc_IRAK 78 346 - -
Lapu9g02358 372 MobiDBLite consensus disorder prediction 18 53 - -
Lapu9g02358 372 FunFam Serine/threonine-protein kinase PBS1 148 363 - -
Lapu9g02358 372 ProSiteProfiles Protein kinase domain profile. 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02358 372 Pfam Protein kinase domain 72 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02358 372 FunFam probable serine/threonine-protein kinase RLCKVII 44 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02358 Lapu-Chr9 38152766 38170364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02358 1 350 Glycoside Hydrolase AT3G07070 59.218 6.19e-151 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lapu9g02358 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02358 - - gmx:100796595 597.816