Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02336 ATGACTTCGCCTTCTGACCTAAACCTCTCTCTGCAATATCCTTCTGCGTGCAGGGATGACACCGTGGTCGAAGATTACCATGGCGTCAAAATTGCCGATCCTTACCGATGGCTCGAAGATCCTGATGCGGAAGAAGTGAAAGAGTTCGTAAACAGACAGGTTGAACTGACGGATTCGGTTCTTCAAAAATGCGAAACTAGAGGGAAGCTTAGGGAAACGATAACGAAGCTTTTTGACCATCCTCGTTACTACTCGCCGTTTAGACGAGCGGATAAGTACTTCTACTTCCACAACACTGGGCTTCAGCCACAAAATATTCTATATGTGCAGGAGAGTTTGGAGGGAGAGGCAGAGGTGTTGCTCGATCCCAATGGCTTCAGTGAAGACGGAACTGTGTCGCTGAGCACTCTGTCAGTGAGCGAAGATGGCAAATACTTGGCTTATGCGCTTAGTTCAAGCGGTAGCGACTGGACGACTATAAAAGTGCTGCGGATTGACGACAGGAATGTTGAGCCTGATACTTTAACGTGGGTAAAGTTTTCCTCAATTAGTTGGACGCATGACAACAAAGGTTTCTTTTATAGCCGCTATCCAGCACCAAAAGATAGAGAAGTAGTAGATGCTGGGACTGAAACAAATGCTAACCTTCATCATCAGCTCTATTACCATTTTTTGGGTACAGATCAATCAGAAGATATTTTGTGCTGGAGAGATCCTGAAAACCCTAAATATACGTTTGGAGGAAGTGTTACCGATGATGGCAAGTATATCCTTCTCAATATTGCAGAAGGGTGCGATCCAGTTAACAAACTTTACTACTGTGACTTGTCCAAAATTCCTAATGCCCTGGAAGGTTTTCGGAATGGAAATTCCCTCCTCCCATTTGTCAAACTTGTTGATAACTTTGATGCACAGTATGAAGCCATTGCGAATGATGACACTGTGTTTACATTTTTAACTAATAAAGATGCTCCAAAATATAAATTAGTCCGAGTGGATTTGAAAGAACCAAGTGCTTGGGCTGATGTTCTCGAAGAGTCAGAAAAAGATGTGCTTGAGTCAGCATGTGCTGTAAATGGTAACCAACTGATAGTGAGTTACTTGAGCGATGTAAAGTATCTTCTGCAAGTTAGAGACTTAAAAACAGGTTCCTTGCTGCACCAATTACCAATTGACATTGGCTCGATTTCTGAAGTATCTGGGCGGCGTGAAGATAGTGTGGTTTTCATTAGCTTTACAAGCTTTTTAACCCCTGGTATCGTCTACCAGTGCAACCTGGGAACAGAGATTCCTGACATGAAGATATTTCGTGAAATTGTTGTCCCTGGGTTTGATCGATCTGAATTTCTTGTTAAACAGGATTTCGTGAGTAGTAAAGATGGTACCAAGATCCCAGTGTTCATCGTCGCCAAAAGGGATATTATTTTGGATGGTTCACACCCATGTTTATTATATGGATATGGTGGTTTTAACATCAGCATTACACCATATTTCAGTGTCAGTCGCATTGTAATCACAAGACATTTAGGTGTTGTTTTCTGCATAGCAAATATCCGTGGTGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGGCTCCCTTGCAAGAAAGCAGAATTGCTTTGATGACTTTATTTCTGCAGCTGAATACCTTGTATCTACGGGTTATACTCAACCCAAAAAGTTATGCATTGAAGGTGGAAGCAATGGTGGACTTCTTGTTGGTGCTTGTATAAATCAGAGACCGGATTTATTTGGTTGCGCTCTGGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAATTTACAATAGGTCATGCTTGGACCTCAGATTATGGTTGTTCAGACAAGGAGGAAGAGTTTCATTGGCTAATCAAATACTCTCCACTACATAATGTCCGGAGACCGTGGGAACAACATACTGATCAGTCTATTCAGTATCCATCAACCATGCTGTTGACAGCCGATCATGATGATCGTGTTGTGCCACTGCACACATTGAAGCTATTAGCGACCATGCAGCATGTCCTCTGTACGAGCTTGGAAGAAAGTCCCCAGACAAACCCTATAATTGGTCGCATTGACTGCAAGTCTGGACACGGGGCTGGACGTCCAACACAGAAAATGATTGATGAAGCTGCTGACCGGTACAGTTTTATGGCTAAAATGCTAGAAGTGTGTTGGATTGAATAG 2196 0.429 MTSPSDLNLSLQYPSACRDDTVVEDYHGVKIADPYRWLEDPDAEEVKEFVNRQVELTDSVLQKCETRGKLRETITKLFDHPRYYSPFRRADKYFYFHNTGLQPQNILYVQESLEGEAEVLLDPNGFSEDGTVSLSTLSVSEDGKYLAYALSSSGSDWTTIKVLRIDDRNVEPDTLTWVKFSSISWTHDNKGFFYSRYPAPKDREVVDAGTETNANLHHQLYYHFLGTDQSEDILCWRDPENPKYTFGGSVTDDGKYILLNIAEGCDPVNKLYYCDLSKIPNALEGFRNGNSLLPFVKLVDNFDAQYEAIANDDTVFTFLTNKDAPKYKLVRVDLKEPSAWADVLEESEKDVLESACAVNGNQLIVSYLSDVKYLLQVRDLKTGSLLHQLPIDIGSISEVSGRREDSVVFISFTSFLTPGIVYQCNLGTEIPDMKIFREIVVPGFDRSEFLVKQDFVSSKDGTKIPVFIVAKRDIILDGSHPCLLYGYGGFNISITPYFSVSRIVITRHLGVVFCIANIRGGGEYGEEWHKAGSLARKQNCFDDFISAAEYLVSTGYTQPKKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSDKEEEFHWLIKYSPLHNVRRPWEQHTDQSIQYPSTMLLTADHDDRVVPLHTLKLLATMQHVLCTSLEESPQTNPIIGRIDCKSGHGAGRPTQKMIDEAADRYSFMAKMLEVCWIE* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02336 731 Pfam Prolyl oligopeptidase family 496 726 IPR001375 GO:0006508|GO:0008236
Lapu9g02336 731 Gene3D alpha/beta hydrolase 22 721 IPR029058 -
Lapu9g02336 731 SUPERFAMILY alpha/beta-Hydrolases 452 676 IPR029058 -
Lapu9g02336 731 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 14 429 IPR023302 GO:0004252
Lapu9g02336 731 ProSitePatterns Prolyl endopeptidase family serine active site. 543 573 IPR002471 GO:0004252|GO:0006508
Lapu9g02336 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 536 555 IPR002470 GO:0004252|GO:0006508
Lapu9g02336 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 481 499 IPR002470 GO:0004252|GO:0006508
Lapu9g02336 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 508 532 IPR002470 GO:0004252|GO:0006508
Lapu9g02336 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 648 670 IPR002470 GO:0004252|GO:0006508
Lapu9g02336 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 566 586 IPR002470 GO:0004252|GO:0006508
Lapu9g02336 731 PANTHER PROLYL ENDOPEPTIDASE 9 729 - -
Lapu9g02336 731 SUPERFAMILY Peptidase/esterase 'gauge' domain 9 429 - -
Lapu9g02336 731 FunFam Prolyl endopeptidase 403 721 - -
Lapu9g02336 731 FunFam Prolyl endopeptidase 81 440 - -
Lapu9g02336 731 Gene3D - 81 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02336 Lapu-Chr9 37926921 37933023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02336 510 613 Carbohydrate Esterase AT5G36210 34.906 3.20e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02336 9 37926921 37933023 Lapu9g02336 9 37926921 37933023 ECH
Lapu8g01060 8 28589218 28594164 Lapu9g02336 9 37926921 37933023 PCT