Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02334 ATGCATGAAATCACAATTTCAACAAATGACAAGCCAAAACTTCTGAGTCAGTTGACTTCCTTACTTTCTGAGACTGGGTTGGACATTCTAGAAGCACATGCTTTTTCCACAATAGACGGCTTTTCATTAGATGTTTTTGTTGTTGGTGGTTGGCCAGTTGAGGAGACGGAGAAGTTAAAATATGAACTAGCAAAGAAAATTCAGAAACTCCAGAAGCAACATCAATTGAAAGAAAATGGGAGTCTTCCTACTACTGCAAAACAAGAGCAAACCGGGATGAACTTTATCTGGAGAATTGATGCTGGGTGTCTGAGATATGAAAAGAAAATTGCATCTGGACCTTTAAGTGATTTGTACAAAGGTACATTCTACAATCAAGATGTAGCTATCAAGGTTCTTAAGCACGAGAATTTGAATGAAAATATACAAAGGGAGTTTGCTCAGGAAGTGTATTCTTGCAGTAAAATTCAGCACAAAAATATTGTTAAATTTGTTGGCGCTTGTACAAAACCCCCAAACCTATACATAGTCACAGAATACATGCCTGGTGGAAGTATGTTCGACTTTTTGCATAAACAGAAGACCAGCCTTGCTCTTCCATATTTACTCAAAGTGGCCATTGATGTTTCCGAAGGAATGAAATATTTGCATCAGAATAATATCATACATCGGGACCTTAAAGCGGCTAATCTTTTGATAGATGAGAATGGGGTAGTTAAGGTTGCTGATTTTGGTGTAGCTAGAGTGCACAATCAGTCTGGTATAATGACTGCAGAAACAGGAACTTATCGATGGATGGCTCCAGAGGTTATTGAACATAAACCATATGATCACAAAGCCGATGTCTTTAGCTTTGCCATTGTTCTTTGGGAGCTGCTCACAGGAAAGCTTCCTTATGAGCATTTGTCCCCATTGCAAGCAGCAGTAGGAGTGATCCAGAAGGGATTAAGGCCTAAAATTCCAAGCCATACTCATATAAAGTTAGTGGAATTGCTTCACTGGTGCTGGCACCACGATTCATCTTTGAGACCCAATTTCTCAGAAATTTCGGAATTTCTGCGACGTCTGACCAAGACGGTATGTGGAGGGGAGTCTTGA 1098 0.398 MHEITISTNDKPKLLSQLTSLLSETGLDILEAHAFSTIDGFSLDVFVVGGWPVEETEKLKYELAKKIQKLQKQHQLKENGSLPTTAKQEQTGMNFIWRIDAGCLRYEKKIASGPLSDLYKGTFYNQDVAIKVLKHENLNENIQREFAQEVYSCSKIQHKNIVKFVGACTKPPNLYIVTEYMPGGSMFDFLHKQKTSLALPYLLKVAIDVSEGMKYLHQNNIIHRDLKAANLLIDENGVVKVADFGVARVHNQSGIMTAETGTYRWMAPEVIEHKPYDHKADVFSFAIVLWELLTGKLPYEHLSPLQAAVGVIQKGLRPKIPSHTHIKLVELLHWCWHHDSSLRPNFSEISEFLRRLTKTVCGGES* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02334 365 SUPERFAMILY ACT-like 2 74 IPR045865 -
Lapu9g02334 365 Pfam Protein tyrosine and serine/threonine kinase 105 353 IPR001245 GO:0004672|GO:0006468
Lapu9g02334 365 ProSiteProfiles ACT domain profile. 3 79 IPR002912 -
Lapu9g02334 365 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 66 356 - -
Lapu9g02334 365 PIRSF ILK 49 363 - -
Lapu9g02334 365 SMART serkin_6 104 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02334 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Lapu9g02334 365 Coils Coil 53 73 - -
Lapu9g02334 365 SUPERFAMILY Protein kinase-like (PK-like) 81 352 IPR011009 -
Lapu9g02334 365 CDD STKc_MAP3K-like 110 353 - -
Lapu9g02334 365 Gene3D Phosphorylase Kinase; domain 1 94 180 - -
Lapu9g02334 365 PRINTS Tyrosine kinase catalytic domain signature 178 191 IPR001245 GO:0004672|GO:0006468
Lapu9g02334 365 PRINTS Tyrosine kinase catalytic domain signature 261 271 IPR001245 GO:0004672|GO:0006468
Lapu9g02334 365 PRINTS Tyrosine kinase catalytic domain signature 280 302 IPR001245 GO:0004672|GO:0006468
Lapu9g02334 365 PRINTS Tyrosine kinase catalytic domain signature 324 346 IPR001245 GO:0004672|GO:0006468
Lapu9g02334 365 PRINTS Tyrosine kinase catalytic domain signature 215 233 IPR001245 GO:0004672|GO:0006468
Lapu9g02334 365 Gene3D Transferase(Phosphotransferase) domain 1 181 361 - -
Lapu9g02334 365 ProSiteProfiles Protein kinase domain profile. 104 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02334 365 FunFam Receptor tyrosine-protein kinase erbB-2 181 360 - -
Lapu9g02334 365 FunFam Kinase suppressor of Ras 1 93 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02334 Lapu-Chr9 37892625 37899592 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02334 1 364 MAP Kinase Kinase Kinase AT4G35780 62.500 7.03e-166 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lapu9g02334 PK_Tyr_Ser-Thr 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02334 - - vum:124824038 669.463