Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02333 CATAAAGAAAACAAGCATAAGGCTAAGGTTATATTCTGTGGCGTGAAAGAGAATCTAATGACCCAAAGAGAGGAAGTTGTGCTTGATTTCGAAGGTAACAATGGCCGCAGCAACAGCAGAGAAGAAAATTTAACATCAAAAGCTATTGTCAACAGTTCAAGTGACAAGCTTCATCAAGACTTGCAGGAAAAACGCAAAGGCAGTGAATCAACAAGAAAGAGGAAGCAAGATCAGCAGAAAAACCCAGAAAGCCACCTACAAACTTCACATTCAGAAGAAAACGTTGTGAGTTCCAGTTCAAACAATTCAACTCCACGATACTCCTGGAAATCATCAATAAGCAGGACAAAGTCTCGGCTGATTGACCCTCCAGAGGAATCATGCGCAAATTCAGTGTCAAGTGAACAAAAAAGGGTAGAAAATGATGACAGTGTGGAGGATATGCCAGAAATTTATAAAAAAACTAGGTTCAGTGCGTTCTCACTACTTCAGTGGCTGTGTCTCGCTTCAATAATCATAGCCTTGCTTTCAAACGTTTGGATATCGCGCTTACAAAAACTCAAACTCTTTGGCCTTCCCCTGTGGGAATGGGAGACAATGATTTTAGTTCTAATTTGTGGGCGTTTGCTCTCAGGTTGGGTAATCAAACTAATCGTGTTCTTCGTGGAACGCAATTTCATACTTAGAAAACGGGTGCTGTATTTTGTGTACGGTTTGAAAAACTCAGTGAAAAACTGTGTCTGGTTGGGTCTTGTTCTGCTGGTGTGGCATTTTATTCTGGTCAACGCGGTGAAGAAGAAAATCAACGACAGGGTTTTGTCGTGTGTGACAAAGGTTGTGGTGTGTCTGTTCATCGGAACACTGATGTGGCTTCTTAAAACGATCCTCGTCAAGGTCTTCGCCTTGCACTTCCACGTGAAAGCGTTCTTCGAACGGATTCGGGAGGCTCTGTTCAGCCAATACGTGATCGAAACGCTGTCGTGTGATAGGTTGAGGGAAGAGGAGGAAGGTGAAGAAGATAGATCCGTTGGGAGAGTGTTGTGTAATAAGAAGAAGGAAGATGAGGAAATATCGATTGGGCAATTGCATAGGTTGAATAAGAGAAACATATCTGCGTGGAATATGAAGAGAATGATTAACATCGTCATGCATGGGGTGTTTACTACGTTGGACGAACGTATTTTGTGTTCGGATATTGAGGATGAGCCTTTGCTGCAACTTCGAAGCGAATGCCAAGCAAAGATCGCGGCTCACCAAATTTTTCATAACGTGGCGCAGCCAGGATCCCAATGTATTTTCCTGCAAGATGTGATGCAGTTTATGCGAAGAGACGAGGCTTTGAAGTCAATGGATCTGTTGGGAGCAGCGTGTACAGACCAGGGGATTAGCATGTCTTCTCTTACAGAGTGGATGGTGAATGCATTCAGGGAGAGAAGGGCGTTGGCACTATCACTCAAAGACACAAAAACTGCTGTGGACGAACTCCATAATATGTTGAACATGATTGTTGGTATTGTCATTTTGATAGTCTGGCTTGTCATACTTGGAACTCCAATCCTACACTTCCTTGTCTTCATGGGATCCCAGCTTCTGTTGGTAGTGTTTGTGTTTGGGAATTCTTGTAAAACTGTTTTTGAAGCAATCATCTTCTTATTTGTAATGCATCCATTTGATGTTGGTGATCGATGTGAAGTAGATGGAATCCAGATGGTAGTGGAAGAGATGAATATACTCACAACAGTGTTTCTGAAGTGCGATAACCAAAAGGTTACATACCCAAACAGTGTTCTAGCTACCAAGCCGATTAGTAACTATCAACGAAGTCCAGACATGGGAGATGCAGTGGATTTCTGTATTCATATCTCCACTCCACTAGATAAAGTTGCAACTATGAAAAGAAGAATTATAGAGTATATTGAAAGGAAGAATGAACACTGGCATGTGGCACCAATGGTGATAATGAAGGATGTGGAAGACTTGAACAGAGTGAACATGTCAGTGTGGCTTACACACAAAATGAATTATCAGGACATGAAAGAGAGATGGAACAGGAGGGCCCAGTTGATTGAAGAGATGATGAAAGTGTTGAAGGAACTTGATGTTGAATACAGGCTTCTCCCCATTGATGTGAATGTTAGAAATCAACCTCCTCTGCTTTCCAACAAGCTTCCATCCAATTGGAAAACTTGTGCCACCTCTTCGTCTTAG 2208 0.4221 HKENKHKAKVIFCGVKENLMTQREEVVLDFEGNNGRSNSREENLTSKAIVNSSSDKLHQDLQEKRKGSESTRKRKQDQQKNPESHLQTSHSEENVVSSSSNNSTPRYSWKSSISRTKSRLIDPPEESCANSVSSEQKRVENDDSVEDMPEIYKKTRFSAFSLLQWLCLASIIIALLSNVWISRLQKLKLFGLPLWEWETMILVLICGRLLSGWVIKLIVFFVERNFILRKRVLYFVYGLKNSVKNCVWLGLVLLVWHFILVNAVKKKINDRVLSCVTKVVVCLFIGTLMWLLKTILVKVFALHFHVKAFFERIREALFSQYVIETLSCDRLREEEEGEEDRSVGRVLCNKKKEDEEISIGQLHRLNKRNISAWNMKRMINIVMHGVFTTLDERILCSDIEDEPLLQLRSECQAKIAAHQIFHNVAQPGSQCIFLQDVMQFMRRDEALKSMDLLGAACTDQGISMSSLTEWMVNAFRERRALALSLKDTKTAVDELHNMLNMIVGIVILIVWLVILGTPILHFLVFMGSQLLLVVFVFGNSCKTVFEAIIFLFVMHPFDVGDRCEVDGIQMVVEEMNILTTVFLKCDNQKVTYPNSVLATKPISNYQRSPDMGDAVDFCIHISTPLDKVATMKRRIIEYIERKNEHWHVAPMVIMKDVEDLNRVNMSVWLTHKMNYQDMKERWNRRAQLIEEMMKVLKELDVEYRLLPIDVNVRNQPPLLSNKLPSNWKTCATSSS* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02333 735 MobiDBLite consensus disorder prediction 32 56 - -
Lapu9g02333 735 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 43 727 IPR016688 -
Lapu9g02333 735 MobiDBLite consensus disorder prediction 30 143 - -
Lapu9g02333 735 Pfam Mechanosensitive ion channel 497 702 IPR006685 GO:0016020|GO:0055085
Lapu9g02333 735 Coils Coil 679 699 - -
Lapu9g02333 735 MobiDBLite consensus disorder prediction 57 81 - -
Lapu9g02333 735 FunFam Predicted mechanosensitive ion channel 556 605 - -
Lapu9g02333 735 PIRSF Memb_At2g17000 6 735 IPR016688 -
Lapu9g02333 735 Gene3D - 556 605 IPR023408 -
Lapu9g02333 735 MobiDBLite consensus disorder prediction 82 118 - -
Lapu9g02333 735 Coils Coil 58 78 - -
Lapu9g02333 735 SUPERFAMILY Sm-like ribonucleoproteins 546 605 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02333 Lapu-Chr9 37887883 37890672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02333 68 735 Mechanosensitive Ion Channel Family AT1G78610 49.116 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02333 K22048 - cave:132190409 842.032