Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02330 ATGCCTACAAAACACAGCACCGTCGTCTACCTCCATGGCACCCTCGATCTGGTAATCGTCGAGGCTCGCTCCCTTCCCAACATGGACTTGCTCTCCGAGCGCGTCCGAAGGTTCTTCTCCGCCCTCAACACTTGCAGCGCCTCTATCACCGGAAAACGGAAGCTCCACCGTGCCCGCCATCACCACCGCAAGATCATCACCAGCGATCCCTACGTCACCGTCTGCCTCGCCGGCGCCACCGTTGCCCGCACCCGCGTGATCTCTAACTCGCAGAACCCTACCTGGGACGAGCACTTCAAGATCCCGCTCGCGCACCCGGCCTCGCAGGTCGACTTCTTCGTGAAGGACAACGACATGTTCGGCGCGGACCTCATCGGAGTTGTCACTGTCTCCGCCGAGAGAATCCTCTCCTGCGAAGCCATCAGCGACTGGTTCCCGGTCATCGGCTCGTTCGGGAAGCCGCCGAAGCCTGATTGCGCGCTGCGCCTTGCGATGAAATTCACGAGGTGCGAGGACACTCGCATGTTCCGGTCCATGGACGAACCGGATCCACAACGGTTCGTGGTTCGGGAATCGTATTTCCCGGTCCGGCACGGAGGAGCGGTGACGCTGTATCAGGACGCACACGTGCCTGAGGCGATGTTGCCGGAGGTTGAGTTAGAGGAGGGTGTGACGTTTGAGCATGGGAGGTGCTGGGAAGATATATGCCACGCCATTCTGGAAGCGCATCATTTAGTTTACATTGTGGGTTGGTCCATCTACCACAAGGTTAGGCTCGTGAGAGAGCCTACCAAACCCTTACCTAGCGGTGGCAGTTTGAATTTGGGGGAGTTGCTCAAGTACAAGTCCGAAGAAGGTTTGCGAGTTTTACTATTGGTTTGGGATGATAAGACTTCGCACAGCAAATTTTTCATTAACACGACTGGAGTAATGCAAACGCATGATGAAGAAACTCGAAGGTTTTTCAAGCATTCTTCAGTTAGATGTTTGCTGTCACCAAGATATGCCAGCATGGGAACCCTTTCTTTTTGTATTGCCCAAACTGTTGTTGGAACTCTCTTTACACATCATCAGAAATGTGTGATTGTGGATACTCAAGCACACGGCAATAATAGGAAGATAACTGCATTTATAGGTGGTCTAGATCTTTGTGATGGCCGGTATGATACACCCGAGCACAGAATTTTTCGCGATATTGACACGGTTTATCAAGACGATTATCATAATCCCACGTTTTGCACGGGAACCCAGGGTCCAAGGCAACCATGGCATGATTTACATTGCAAAATTGAAGGCCCTGCGGCATATGATATTCTCACTAATTTTGAACAGCGCTGGAAAAAGGCCACCAGATGGTCTGAGTTGGGTCGAAAACTCAAAAGAGTATCTCACTGGCACGATGATTCTTTGATCAAGTTAGAACGCATCTCTTGGATTCTTAGTCCTTCTGAATTAGTTCCAACTGATGATCCTGAACTATGGGTTTCAAAGGAAGACGATCCTAAAAATTGGCATGTTCAGGTTTTTCGATCCATAGATTCTGGGTCTTTGAAAGGATTTCCTAAGGATGTATTTGAAGCTGAGTCCCAGAACCTTGTTTGTGCAAAAAATTTGGTAATAGACAAGAGTATTCAAACAGCATATATACATGCGATCAGATCTGCTCAACATTTTATTTACATCGAGAATCAATATTTTGTTGGATCATCCTTTGCTTGGCCAGCTTACAAAGATGCAGGTGCTGATAACCTAATTCCGATGGAGTTGGCACTGAAGATAGTCAATAAGATACGATCCAAGAAGAGATTTACTGTTTATATTGTCATCCCAATGTGGCCCGAAGGTTCCCCATCTTCTGCTTCTGTGCAAGAGATACTCTTTTGGCAGGGACAAACTATGCAAATGATGTATGATGTCATAGCTCGGGAATTAAAAGTTATGCAACTTGACCATCATCCACAAGATTATCTCAACTTTTATTGTCTTGGAAACCGAGAGCCGTTGAAAACTGATTTTTTAAGCTCAAGTAATTCGCCTCCAGATAATGGTGAAACGATTTCAGCCTCACAAAAGTTCCGAAGGTTCATGATTTATGTACATGCCAAGGGAATGATTGTGGATGATGAATATGTAATTCTTGGATCTGCAAATATCAATCAACGATCTATGGCTGGATCAAGAGATACTGAGATAGCAATGGGTGCCTACCAACCCCATCATACATGGAGTGAGAAAAAGGGGCATCCACACGGTCAGGTATATGGGTATAGGATGTCTTTGTGGGCAGAACACATGGGGAGCATACAAGCTTGCTTTAAGGATCCTAAAAGTCTGGACTGCGTGAAAAGTGTGAACAATATTGCTGAGGAAAACTGGAGGAAGTACATAGATGATGATTATACTCCATTGCAAGGGCACCTCATGAAATATCCTGTGAATGTAAATGCCAATGGGAAGATAAAGTCCATACCTGGATATGAGTCTTTCCCAGATGTTGGGGGCAAGGTGCTTGGCTCCAGGTCTAACCTTCCTGATGCTCTAACCACATAG 2550 0.4694 MPTKHSTVVYLHGTLDLVIVEARSLPNMDLLSERVRRFFSALNTCSASITGKRKLHRARHHHRKIITSDPYVTVCLAGATVARTRVISNSQNPTWDEHFKIPLAHPASQVDFFVKDNDMFGADLIGVVTVSAERILSCEAISDWFPVIGSFGKPPKPDCALRLAMKFTRCEDTRMFRSMDEPDPQRFVVRESYFPVRHGGAVTLYQDAHVPEAMLPEVELEEGVTFEHGRCWEDICHAILEAHHLVYIVGWSIYHKVRLVREPTKPLPSGGSLNLGELLKYKSEEGLRVLLLVWDDKTSHSKFFINTTGVMQTHDEETRRFFKHSSVRCLLSPRYASMGTLSFCIAQTVVGTLFTHHQKCVIVDTQAHGNNRKITAFIGGLDLCDGRYDTPEHRIFRDIDTVYQDDYHNPTFCTGTQGPRQPWHDLHCKIEGPAAYDILTNFEQRWKKATRWSELGRKLKRVSHWHDDSLIKLERISWILSPSELVPTDDPELWVSKEDDPKNWHVQVFRSIDSGSLKGFPKDVFEAESQNLVCAKNLVIDKSIQTAYIHAIRSAQHFIYIENQYFVGSSFAWPAYKDAGADNLIPMELALKIVNKIRSKKRFTVYIVIPMWPEGSPSSASVQEILFWQGQTMQMMYDVIARELKVMQLDHHPQDYLNFYCLGNREPLKTDFLSSSNSPPDNGETISASQKFRRFMIYVHAKGMIVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPHHTWSEKKGHPHGQVYGYRMSLWAEHMGSIQACFKDPKSLDCVKSVNNIAEENWRKYIDDDYTPLQGHLMKYPVNVNANGKIKSIPGYESFPDVGGKVLGSRSNLPDALTT* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02330 849 Gene3D C2 domain 11 178 IPR035892 -
Lapu9g02330 849 PANTHER PHOSPHOLIPASE D 5 839 IPR015679 -
Lapu9g02330 849 CDD C2_plant_PLD 8 168 - -
Lapu9g02330 849 Pfam PLD-like domain 549 731 IPR025202 -
Lapu9g02330 849 SUPERFAMILY Phospholipase D/nuclease 180 460 - -
Lapu9g02330 849 Pfam Phospholipase D C terminal 770 839 IPR024632 -
Lapu9g02330 849 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 152 IPR035892 -
Lapu9g02330 849 SUPERFAMILY Phospholipase D/nuclease 544 780 - -
Lapu9g02330 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 352 387 IPR001736 GO:0003824
Lapu9g02330 849 Gene3D Endonuclease Chain A 521 743 - -
Lapu9g02330 849 SMART C2_3c 14 144 IPR000008 -
Lapu9g02330 849 FunFam Phospholipase D delta 222 468 - -
Lapu9g02330 849 SMART pld_4 352 387 IPR001736 GO:0003824
Lapu9g02330 849 SMART pld_4 695 722 IPR001736 GO:0003824
Lapu9g02330 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 695 722 IPR001736 GO:0003824
Lapu9g02330 849 Pfam Phospholipase D Active site motif 353 387 IPR001736 GO:0003824
Lapu9g02330 849 PIRSF PLD_plant 1 849 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lapu9g02330 849 Gene3D Endonuclease Chain A 223 470 - -
Lapu9g02330 849 ProSiteProfiles C2 domain profile. 1 145 IPR000008 -
Lapu9g02330 849 FunFam Phospholipase D 511 741 - -
Lapu9g02330 849 Pfam C2 domain 13 147 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02330 Lapu-Chr9 37867633 37874911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02330 8 678 Phospholipase D Gene Family (Wang group) AT4G35790 64.483 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02330 K01115 - gmx:100795859 1559.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02330 9 37867633 37874911 Lapu9g02330 9 37867633 37874911 ECH