Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02300 ATGACTCTTGAAGATTTCTTTACCTTGACTGAGATGAAAGATGGGCTCACAGCACCTTCTCGGGTGCAGGAGCTGGTCTCTGTGATGCAGAAGGAAAAAAATAGTGAGGTTAAAAATTCTGCTGATGCGACAAGGCAGTGGGCTGCTGTTGCAAGCACTATTGCTGCTACAGAGAATAAAGATTGCCTTGATCTTTTTATTCAATTGGATGGACTTTGCTTCCTCAATAGATGGTTAAAGGATGCCCAAAATTTTGAGGTTGATACAAAAGACAGCTTTGTTGAAGAATCAATTACTGCAATGTTACGTGCAGTTGAAAAGCTTCATCTAGACTGTGAGAAGTTAATGTCATCTGGAATTCGCATCACTGTAAGTAATCTTCTTGGCCATCACAGCGCTAAGGTTCAGGATAGGGCAAGGACATTGTTTGACAGCTGGAAGGGAGCTGAGAATGTTGATACTGAATCTCATGATGTGGAGCTTGCTAAGGTTGACAATGCAAGCAATGAGATTGTGATGGAGGAAGGCCAGCCATCTGCTGTGAATGAAGCTGGCAATGATAATGATCATACATCAGGACTGAATGGAACTGTAAATTCTCTATTGAGAAGCTCAGATAATTCTGATAATGTGTGTCATTCATCCTCCAGTTTGGAATGTGATGACGTCAAAGAGGGATCAGTAAACCATGTTGCTGGTGTTCCATCTTCTGCTCAAGGACTGCCTTTATGCTCTGCAGGTGAGACCACTTCGGTTGGGACCTGTAACTTTTCCCTTCATAATCAAGGCAGTTTTGAAGGACAGTCTGATGTGGTTCAGTTAAGTGACTTGGCTAAAAGGGAAAAGCAGGAGCAAAGCATTAATGACCCTCCAGAAAAATTAGGAGCACCAGAGATCTGTTCTGTGCCCTCTCTGCCGGAGCCCGAGTCTGTTCCCATTGTTTCCTGCGAGGCAAAAGCACCAGAATCTGCTAAAGGACCAGCTAAAAATGCCGAACACAATGAGGATGATGTTTGTCATAACTTACCTGTTTCTACTAGTATGAGAACACCTGCATCTGATGGGAGGAGTGTGGAAGATGATGTTAGAACTTTAACTAGCTTTACACAAGTTTTTAAAGCTGCAGAAAATGTCAATGTATGTTCTAATACATTGCAGGATACATCAGTCGGTGACAGTAACTTGGGAAAGACTGAGGTGTCAGATATGTCTGTCTGTGGAGCAGGATATGTCACACCAAAGGAAGGCAAGGGCCATGTTTATAACGACAAAGAAGTTACATCAATTGGTTCTGATTCTAGTAAACCTGAAATAGATTTCAAAAGGTCTAACATAGTTGACAAGAGAGGTTCTGACGATGAACTTGACTGTGGCATTGTGGATCCTTTAGAATTTGCTCGACAAGTTGCTCAGGAAGTTAATAGAGAAGTCAGCAGTTCTTCCGAAAAAATCTCATATGGCAGAATCAGGCAGCCAGGCAGTTCAGATTCTGTAAGAAAAGAGGATGAGCTCACTCCCGTCCCTGCTGAGGAGGTTTCCTCCAGACAAAGTGTTGCTACTGAGGCATGTTCAATGGAGGGGCGTGCAAGTAGTTTTGACAACACTGAGGCTGAGCCTGAATGCAGACCTGATGTGGTGTGCATGGAGGTGACTGAAGCAGCTCAAGATTCAGGAGGTAATTCAGAGAAACGACCTTGTGCCTTTGATCTCAACGAAGTTGGTTCTGACGATATGGATGTTTGTGTAAATACTGCATCTACCCCAATACCTGTTGTCTCTGCTTCAAGGCCTACGCCAACTCCTGGGTTGCCTGGTACCCCATTGCAGTTTGAGGGAACACTTGGATGGAAAGGATCAGCTGCCACCAGTGCCTTTCGGCCTGCATCTCCTCGGAAATATTGTGATAGTGAGAGGGATCTTTCTGTGGATATGAACTTTGACACTTCCAGGCAGAGGCAGAATTGGCTTGATATTGATCTAAATGTAGCTGAGGGTGAAGAAGGAAATGCAAAACCTATTGCTGAATCTTCTGGCAGGCCTTCTGGGCAATCAACAGTTGAATTTAGTTCTAAAAGATCAAGCATGCTTGGATTTGATTTGAACAGTACGGGTGATGATGGTCACATCCAACCTTCAGATCACAGGATGGAGGGGCAACTATTTCTTGGAAGAAATGGCTATTGGAGCCCATCACCTACATCGTCATCGTCATCAATGCAGCCATATGTTAGGAACATTGATTTAAATGACAGGCCATGCTTTCAAACTGATTTGGTAGACCTGGGGCCCAGTAAGTCTTCTCATACTATCAATGCATATGATTGTTCTAAATCGCCAGATGCTGCTGTTATCTCTCTTTTGGGCGCCAAGGTAGAAGTTGGTAAAAAAGAACGCGTTCCTCAATCGTTTTTGCCGAATGGAAAGGCTGTTGAACCTGCAATAGATCTTACAATGTCAAGAGCAGGTGGCATTATAGGGATGACCCCTACAGTATCCTTCAATCAATCATCTGTTTTTGGGTATAATGGAGTGACATCAGCATCAGCAGCACCCACAATACCTTTTTCATCAGCCATGTACGGGTCAGGTGGCACAATTCCATATATGGTGGACTCAAGAGGAGCTCCGGTTGTCCCTCAAGTGGGTGGACCTTCATTAAATATACTTTCATCATCTTACTCTCAGCCACCAATCTTTATGAACATGACAGGTACACAACTCGGTCTGAATGGATTTGGACCTTCACGTCCTAACTTTGACCTGAACTCTGGGTTCATGATTGAGGGTGGGAATAGAGACACATTGGCGGCAAGGCAATTTTTCTTTCCTGGTCAGGGAAGGGCTGTGGAGGAGCAAGTAAGAACCATGACGCAACCCTCAAGTTCGGGGGTTGGTGGGAAACGAAAGGAACCAGACAGTGGTTGGGAACCCTACCCACATAGCTACAAACATTCGCAACCTCCATGGAAGTAG 2973 0.4433 MTLEDFFTLTEMKDGLTAPSRVQELVSVMQKEKNSEVKNSADATRQWAAVASTIAATENKDCLDLFIQLDGLCFLNRWLKDAQNFEVDTKDSFVEESITAMLRAVEKLHLDCEKLMSSGIRITVSNLLGHHSAKVQDRARTLFDSWKGAENVDTESHDVELAKVDNASNEIVMEEGQPSAVNEAGNDNDHTSGLNGTVNSLLRSSDNSDNVCHSSSSLECDDVKEGSVNHVAGVPSSAQGLPLCSAGETTSVGTCNFSLHNQGSFEGQSDVVQLSDLAKREKQEQSINDPPEKLGAPEICSVPSLPEPESVPIVSCEAKAPESAKGPAKNAEHNEDDVCHNLPVSTSMRTPASDGRSVEDDVRTLTSFTQVFKAAENVNVCSNTLQDTSVGDSNLGKTEVSDMSVCGAGYVTPKEGKGHVYNDKEVTSIGSDSSKPEIDFKRSNIVDKRGSDDELDCGIVDPLEFARQVAQEVNREVSSSSEKISYGRIRQPGSSDSVRKEDELTPVPAEEVSSRQSVATEACSMEGRASSFDNTEAEPECRPDVVCMEVTEAAQDSGGNSEKRPCAFDLNEVGSDDMDVCVNTASTPIPVVSASRPTPTPGLPGTPLQFEGTLGWKGSAATSAFRPASPRKYCDSERDLSVDMNFDTSRQRQNWLDIDLNVAEGEEGNAKPIAESSGRPSGQSTVEFSSKRSSMLGFDLNSTGDDGHIQPSDHRMEGQLFLGRNGYWSPSPTSSSSSMQPYVRNIDLNDRPCFQTDLVDLGPSKSSHTINAYDCSKSPDAAVISLLGAKVEVGKKERVPQSFLPNGKAVEPAIDLTMSRAGGIIGMTPTVSFNQSSVFGYNGVTSASAAPTIPFSSAMYGSGGTIPYMVDSRGAPVVPQVGGPSLNILSSSYSQPPIFMNMTGTQLGLNGFGPSRPNFDLNSGFMIEGGNRDTLAARQFFFPGQGRAVEEQVRTMTQPSSSGVGGKRKEPDSGWEPYPHSYKHSQPPWK* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02300 990 MobiDBLite consensus disorder prediction 478 518 - -
Lapu9g02300 990 MobiDBLite consensus disorder prediction 323 358 - -
Lapu9g02300 990 MobiDBLite consensus disorder prediction 494 508 - -
Lapu9g02300 990 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 17 150 IPR035441 -
Lapu9g02300 990 MobiDBLite consensus disorder prediction 669 690 - -
Lapu9g02300 990 ProSiteProfiles TFIIS N-terminal domain profile. 73 153 IPR017923 -
Lapu9g02300 990 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 154 IPR035441 -
Lapu9g02300 990 MobiDBLite consensus disorder prediction 676 690 - -
Lapu9g02300 990 Pfam TFIIS helical bundle-like domain 101 148 IPR017923 -
Lapu9g02300 990 MobiDBLite consensus disorder prediction 952 990 - -
Lapu9g02300 990 MobiDBLite consensus disorder prediction 478 492 - -
Lapu9g02300 990 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 990 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02300 Lapu-Chr9 37615093 37620605 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lapu9g02300 Med26 7.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02300 - - gmx:102669997 1503.03